Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.65■□□□□ 0.26
Pde6dO55057 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pde6dO55057 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.65■□□□□ 0.26
Pde6dO55057 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pde6dO55057 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pde6dO55057 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Pde6dO55057 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6dO55057 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pde6dO55057 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6dO55057 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6dO55057 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6dO55057 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6dO55057 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pde6dO55057 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pde6dO55057 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Pde6dO55057 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Pde6dO55057 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6dO55057 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6dO55057 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6dO55057 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pde6dO55057 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6dO55057 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.61■□□□□ 0.25
Pde6dO55057 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6dO55057 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pde6dO55057 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.6■□□□□ 0.25
Pde6dO55057 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.6■□□□□ 0.25
Pde6dO55057 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6dO55057 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6dO55057 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6dO55057 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pde6dO55057 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6dO55057 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pde6dO55057 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pde6dO55057 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pde6dO55057 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pde6dO55057 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pde6dO55057 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6dO55057 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.58■□□□□ 0.24
Pde6dO55057 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.58■□□□□ 0.24
Pde6dO55057 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.58■□□□□ 0.24
Pde6dO55057 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pde6dO55057 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pde6dO55057 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6dO55057 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6dO55057 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pde6dO55057 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pde6dO55057 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pde6dO55057 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pde6dO55057 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6dO55057 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms