Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-5A0A0G2JFX6 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.6■□□□□ 0.25
Trav7-5A0A0G2JFX6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-5A0A0G2JFX6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav7-5A0A0G2JFX6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav7-5A0A0G2JFX6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav7-5A0A0G2JFX6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7-5A0A0G2JFX6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav7-5A0A0G2JFX6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-5A0A0G2JFX6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-5A0A0G2JFX6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-5A0A0G2JFX6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav7-5A0A0G2JFX6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-5A0A0G2JFX6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-5A0A0G2JFX6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-5A0A0G2JFX6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-5A0A0G2JFX6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm13238-201ENSMUST00000117655 780 ntBASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-5A0A0G2JFX6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trav7-5A0A0G2JFX6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-5A0A0G2JFX6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-5A0A0G2JFX6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-5A0A0G2JFX6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trav7-5A0A0G2JFX6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms