Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tcrg-V4A0A0B4J1J8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.83■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tcrg-V4A0A0B4J1J8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.75■□□□□ 0.11
Tcrg-V4A0A0B4J1J8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms