Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5-1A0A075B5Z7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5-1A0A075B5Z7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5-1A0A075B5Z7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav5-1A0A075B5Z7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav5-1A0A075B5Z7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav5-1A0A075B5Z7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.22■□□□□ 0.51
Trav5-1A0A075B5Z7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav5-1A0A075B5Z7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav5-1A0A075B5Z7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav5-1A0A075B5Z7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trav5-1A0A075B5Z7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav5-1A0A075B5Z7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav5-1A0A075B5Z7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav5-1A0A075B5Z7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms