Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.45■■■□□ 2.31
Smarcb1Q9Z0H3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
Smarcb1Q9Z0H3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Smarcb1Q9Z0H3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Smarcb1Q9Z0H3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Smarcb1Q9Z0H3 Gm8109-201ENSMUST00000194076 746 ntBASIC29.37■■■□□ 2.29
Smarcb1Q9Z0H3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Smarcb1Q9Z0H3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Smarcb1Q9Z0H3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Smarcb1Q9Z0H3 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.18■■■□□ 2.26
Smarcb1Q9Z0H3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Smarcb1Q9Z0H3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smarcb1Q9Z0H3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smarcb1Q9Z0H3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Smarcb1Q9Z0H3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Smarcb1Q9Z0H3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.1■■■□□ 2.25
Smarcb1Q9Z0H3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.08■■■□□ 2.25
Smarcb1Q9Z0H3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Smarcb1Q9Z0H3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Smarcb1Q9Z0H3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.05■■■□□ 2.24
Smarcb1Q9Z0H3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smarcb1Q9Z0H3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Smarcb1Q9Z0H3 Gm27322-201ENSMUST00000184007 104 ntBASIC29.02■■■□□ 2.24
Smarcb1Q9Z0H3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
Smarcb1Q9Z0H3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Smarcb1Q9Z0H3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Smarcb1Q9Z0H3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
Smarcb1Q9Z0H3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Smarcb1Q9Z0H3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Smarcb1Q9Z0H3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
Smarcb1Q9Z0H3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.77■■■□□ 2.2
Smarcb1Q9Z0H3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Smarcb1Q9Z0H3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Smarcb1Q9Z0H3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smarcb1Q9Z0H3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Smarcb1Q9Z0H3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Smarcb1Q9Z0H3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Smarcb1Q9Z0H3 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.59■■■□□ 2.17
Smarcb1Q9Z0H3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Smarcb1Q9Z0H3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Smarcb1Q9Z0H3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Smarcb1Q9Z0H3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Smarcb1Q9Z0H3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Smarcb1Q9Z0H3 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.52■■■□□ 2.16
Smarcb1Q9Z0H3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Smarcb1Q9Z0H3 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.5■■■□□ 2.15
Smarcb1Q9Z0H3 Gm24804-201ENSMUST00000174982 85 ntBASIC28.5■■■□□ 2.15
Smarcb1Q9Z0H3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.5■■■□□ 2.15
Smarcb1Q9Z0H3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Smarcb1Q9Z0H3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.47■■■□□ 2.15
Smarcb1Q9Z0H3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Smarcb1Q9Z0H3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
Smarcb1Q9Z0H3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Smarcb1Q9Z0H3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.44■■■□□ 2.14
Smarcb1Q9Z0H3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Smarcb1Q9Z0H3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Smarcb1Q9Z0H3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.35■■■□□ 2.13
Smarcb1Q9Z0H3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Smarcb1Q9Z0H3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Smarcb1Q9Z0H3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Smarcb1Q9Z0H3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Smarcb1Q9Z0H3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Smarcb1Q9Z0H3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.2■■■□□ 2.11
Smarcb1Q9Z0H3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Smarcb1Q9Z0H3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smarcb1Q9Z0H3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Smarcb1Q9Z0H3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Smarcb1Q9Z0H3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Smarcb1Q9Z0H3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Smarcb1Q9Z0H3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Smarcb1Q9Z0H3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Smarcb1Q9Z0H3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Smarcb1Q9Z0H3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Smarcb1Q9Z0H3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Smarcb1Q9Z0H3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Smarcb1Q9Z0H3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Smarcb1Q9Z0H3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Smarcb1Q9Z0H3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Smarcb1Q9Z0H3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Smarcb1Q9Z0H3 Mipep-204ENSMUST00000225043 1548 ntBASIC28.01■■■□□ 2.07
Smarcb1Q9Z0H3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.99■■■□□ 2.07
Smarcb1Q9Z0H3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
Smarcb1Q9Z0H3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Smarcb1Q9Z0H3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
Smarcb1Q9Z0H3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Smarcb1Q9Z0H3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Smarcb1Q9Z0H3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Smarcb1Q9Z0H3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.89■■■□□ 2.06
Smarcb1Q9Z0H3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Smarcb1Q9Z0H3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Smarcb1Q9Z0H3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Smarcb1Q9Z0H3 Peli2-204ENSMUST00000226513 1320 ntBASIC27.83■■■□□ 2.05
Smarcb1Q9Z0H3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Smarcb1Q9Z0H3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Smarcb1Q9Z0H3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Smarcb1Q9Z0H3 Zfp131-205ENSMUST00000223812 663 ntBASIC27.78■■■□□ 2.04
Smarcb1Q9Z0H3 Gm16148-201ENSMUST00000119653 893 ntBASIC27.77■■■□□ 2.04
Smarcb1Q9Z0H3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Smarcb1Q9Z0H3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Smarcb1Q9Z0H3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms