Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.64■■■□□ 2.65
Ggps1Q9WTN0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
Ggps1Q9WTN0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ggps1Q9WTN0 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.51■■■□□ 2.63
Ggps1Q9WTN0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ggps1Q9WTN0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ggps1Q9WTN0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ggps1Q9WTN0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ggps1Q9WTN0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.33■■■□□ 2.61
Ggps1Q9WTN0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ggps1Q9WTN0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
Ggps1Q9WTN0 Gm27322-201ENSMUST00000184007 104 ntBASIC31.26■■■□□ 2.59
Ggps1Q9WTN0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ggps1Q9WTN0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Ggps1Q9WTN0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ggps1Q9WTN0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ggps1Q9WTN0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ggps1Q9WTN0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ggps1Q9WTN0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ggps1Q9WTN0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.06■■■□□ 2.56
Ggps1Q9WTN0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Ggps1Q9WTN0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Ggps1Q9WTN0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31■■■□□ 2.55
Ggps1Q9WTN0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Ggps1Q9WTN0 Gm24804-201ENSMUST00000174982 85 ntBASIC30.95■■■□□ 2.55
Ggps1Q9WTN0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Ggps1Q9WTN0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.88■■■□□ 2.53
Ggps1Q9WTN0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.88■■■□□ 2.53
Ggps1Q9WTN0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Ggps1Q9WTN0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ggps1Q9WTN0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ggps1Q9WTN0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ggps1Q9WTN0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ggps1Q9WTN0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Ggps1Q9WTN0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Ggps1Q9WTN0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ggps1Q9WTN0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ggps1Q9WTN0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ggps1Q9WTN0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ggps1Q9WTN0 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.66■■■□□ 2.5
Ggps1Q9WTN0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Ggps1Q9WTN0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ggps1Q9WTN0 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.62■■■□□ 2.49
Ggps1Q9WTN0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ggps1Q9WTN0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.6■■■□□ 2.49
Ggps1Q9WTN0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ggps1Q9WTN0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Ggps1Q9WTN0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ggps1Q9WTN0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ggps1Q9WTN0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ggps1Q9WTN0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ggps1Q9WTN0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ggps1Q9WTN0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ggps1Q9WTN0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ggps1Q9WTN0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ggps1Q9WTN0 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.39■■■□□ 2.46
Ggps1Q9WTN0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ggps1Q9WTN0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.38■■■□□ 2.45
Ggps1Q9WTN0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Ggps1Q9WTN0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ggps1Q9WTN0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Ggps1Q9WTN0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Ggps1Q9WTN0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Ggps1Q9WTN0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Ggps1Q9WTN0 Zfp131-205ENSMUST00000223812 663 ntBASIC30.19■■■□□ 2.42
Ggps1Q9WTN0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ggps1Q9WTN0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ggps1Q9WTN0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ggps1Q9WTN0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.13■■■□□ 2.41
Ggps1Q9WTN0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ggps1Q9WTN0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ggps1Q9WTN0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ggps1Q9WTN0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ggps1Q9WTN0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ggps1Q9WTN0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Ggps1Q9WTN0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30■■■□□ 2.39
Ggps1Q9WTN0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ggps1Q9WTN0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.98■■■□□ 2.39
Ggps1Q9WTN0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Ggps1Q9WTN0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Ggps1Q9WTN0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ggps1Q9WTN0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ggps1Q9WTN0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Ggps1Q9WTN0 Mipep-204ENSMUST00000225043 1548 ntBASIC29.91■■■□□ 2.38
Ggps1Q9WTN0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Ggps1Q9WTN0 Gm16148-201ENSMUST00000119653 893 ntBASIC29.91■■■□□ 2.38
Ggps1Q9WTN0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
Ggps1Q9WTN0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ggps1Q9WTN0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
Ggps1Q9WTN0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.89■■■□□ 2.38
Ggps1Q9WTN0 Peli2-204ENSMUST00000226513 1320 ntBASIC29.89■■■□□ 2.38
Ggps1Q9WTN0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Ggps1Q9WTN0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Ggps1Q9WTN0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Ggps1Q9WTN0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Ggps1Q9WTN0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Ggps1Q9WTN0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Ggps1Q9WTN0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.77■■■□□ 2.36
Ggps1Q9WTN0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ggps1Q9WTN0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms