Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RtcAQ9D7H3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
RtcAQ9D7H3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RtcAQ9D7H3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.22■■□□□ 1.95
RtcAQ9D7H3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
RtcAQ9D7H3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RtcAQ9D7H3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RtcAQ9D7H3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
RtcAQ9D7H3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RtcAQ9D7H3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.12■■□□□ 1.93
RtcAQ9D7H3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.1■■□□□ 1.93
RtcAQ9D7H3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RtcAQ9D7H3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
RtcAQ9D7H3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RtcAQ9D7H3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RtcAQ9D7H3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27■■□□□ 1.91
RtcAQ9D7H3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RtcAQ9D7H3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RtcAQ9D7H3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RtcAQ9D7H3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.93■■□□□ 1.9
RtcAQ9D7H3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.9■■□□□ 1.9
RtcAQ9D7H3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RtcAQ9D7H3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RtcAQ9D7H3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
RtcAQ9D7H3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
RtcAQ9D7H3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.79■■□□□ 1.88
RtcAQ9D7H3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RtcAQ9D7H3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RtcAQ9D7H3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RtcAQ9D7H3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RtcAQ9D7H3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.68■■□□□ 1.86
RtcAQ9D7H3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RtcAQ9D7H3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RtcAQ9D7H3 Gm26115-201ENSMUST00000175605 87 ntBASIC26.65■■□□□ 1.86
RtcAQ9D7H3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RtcAQ9D7H3 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.61■■□□□ 1.85
RtcAQ9D7H3 Gm8109-201ENSMUST00000194076 746 ntBASIC26.6■■□□□ 1.85
RtcAQ9D7H3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.58■■□□□ 1.85
RtcAQ9D7H3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RtcAQ9D7H3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.57■■□□□ 1.84
RtcAQ9D7H3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RtcAQ9D7H3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RtcAQ9D7H3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RtcAQ9D7H3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RtcAQ9D7H3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RtcAQ9D7H3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RtcAQ9D7H3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RtcAQ9D7H3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RtcAQ9D7H3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
RtcAQ9D7H3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RtcAQ9D7H3 Gm27322-201ENSMUST00000184007 104 ntBASIC26.43■■□□□ 1.82
RtcAQ9D7H3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RtcAQ9D7H3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RtcAQ9D7H3 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.41■■□□□ 1.82
RtcAQ9D7H3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RtcAQ9D7H3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RtcAQ9D7H3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RtcAQ9D7H3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RtcAQ9D7H3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RtcAQ9D7H3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
RtcAQ9D7H3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RtcAQ9D7H3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RtcAQ9D7H3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RtcAQ9D7H3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.3■■□□□ 1.8
RtcAQ9D7H3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RtcAQ9D7H3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.14■■□□□ 1.78
RtcAQ9D7H3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RtcAQ9D7H3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RtcAQ9D7H3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RtcAQ9D7H3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
RtcAQ9D7H3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RtcAQ9D7H3 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.1■■□□□ 1.77
RtcAQ9D7H3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RtcAQ9D7H3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
RtcAQ9D7H3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RtcAQ9D7H3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RtcAQ9D7H3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RtcAQ9D7H3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RtcAQ9D7H3 Mipep-204ENSMUST00000225043 1548 ntBASIC26.01■■□□□ 1.75
RtcAQ9D7H3 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RtcAQ9D7H3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RtcAQ9D7H3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RtcAQ9D7H3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RtcAQ9D7H3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RtcAQ9D7H3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RtcAQ9D7H3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RtcAQ9D7H3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.89■■□□□ 1.74
RtcAQ9D7H3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RtcAQ9D7H3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RtcAQ9D7H3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
RtcAQ9D7H3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RtcAQ9D7H3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
RtcAQ9D7H3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RtcAQ9D7H3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RtcAQ9D7H3 Gm24804-201ENSMUST00000174982 85 ntBASIC25.79■■□□□ 1.72
RtcAQ9D7H3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RtcAQ9D7H3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RtcAQ9D7H3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RtcAQ9D7H3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.76■■□□□ 1.71
RtcAQ9D7H3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms