Protein–RNA interactions for Protein: Q9D1C9

Rrp7a, Ribosomal RNA-processing protein 7 homolog A, mousemouse

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp7aQ9D1C9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC42.06■■■■■ 4.32
Rrp7aQ9D1C9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC42.05■■■■■ 4.32
Rrp7aQ9D1C9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC42.04■■■■■ 4.32
Rrp7aQ9D1C9 Gm27322-201ENSMUST00000184007 104 ntBASIC42.03■■■■■ 4.32
Rrp7aQ9D1C9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.99■■■■■ 4.31
Rrp7aQ9D1C9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC41.97■■■■■ 4.31
Rrp7aQ9D1C9 Gm24804-201ENSMUST00000174982 85 ntBASIC41.96■■■■■ 4.31
Rrp7aQ9D1C9 Gm10524-201ENSMUST00000181931 1893 ntBASIC41.9■■■■■ 4.3
Rrp7aQ9D1C9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC41.86■■■■■ 4.29
Rrp7aQ9D1C9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.85■■■■■ 4.29
Rrp7aQ9D1C9 Gm42596-201ENSMUST00000196305 1958 ntBASIC41.84■■■■■ 4.29
Rrp7aQ9D1C9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC41.79■■■■■ 4.28
Rrp7aQ9D1C9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
Rrp7aQ9D1C9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC41.73■■■■■ 4.27
Rrp7aQ9D1C9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC41.69■■■■■ 4.26
Rrp7aQ9D1C9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC41.67■■■■■ 4.26
Rrp7aQ9D1C9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.59■■■■■ 4.25
Rrp7aQ9D1C9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
Rrp7aQ9D1C9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
Rrp7aQ9D1C9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
Rrp7aQ9D1C9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC41.36■■■■■ 4.21
Rrp7aQ9D1C9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC41.31■■■■■ 4.2
Rrp7aQ9D1C9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41.3■■■■■ 4.2
Rrp7aQ9D1C9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.25■■■■■ 4.19
Rrp7aQ9D1C9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC41.2■■■■■ 4.19
Rrp7aQ9D1C9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41.18■■■■■ 4.18
Rrp7aQ9D1C9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
Rrp7aQ9D1C9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC41.17■■■■■ 4.18
Rrp7aQ9D1C9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC41.15■■■■■ 4.18
Rrp7aQ9D1C9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC41.13■■■■■ 4.17
Rrp7aQ9D1C9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
Rrp7aQ9D1C9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC41.1■■■■■ 4.17
Rrp7aQ9D1C9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
Rrp7aQ9D1C9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC41.06■■■■■ 4.16
Rrp7aQ9D1C9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC41.05■■■■■ 4.16
Rrp7aQ9D1C9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC41.03■■■■■ 4.16
Rrp7aQ9D1C9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC41.01■■■■■ 4.16
Rrp7aQ9D1C9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC41■■■■■ 4.15
Rrp7aQ9D1C9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC41■■■■■ 4.15
Rrp7aQ9D1C9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.99■■■■■ 4.15
Rrp7aQ9D1C9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Rrp7aQ9D1C9 Zfp131-205ENSMUST00000223812 663 ntBASIC40.97■■■■■ 4.15
Rrp7aQ9D1C9 AC166822.3-201ENSMUST00000227394 661 ntBASIC40.97■■■■■ 4.15
Rrp7aQ9D1C9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.96■■■■■ 4.15
Rrp7aQ9D1C9 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.89■■■■■ 4.14
Rrp7aQ9D1C9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
Rrp7aQ9D1C9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC40.8■■■■■ 4.12
Rrp7aQ9D1C9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Rrp7aQ9D1C9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Rrp7aQ9D1C9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC40.71■■■■■ 4.11
Rrp7aQ9D1C9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
Rrp7aQ9D1C9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC40.68■■■■■ 4.1
Rrp7aQ9D1C9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40.65■■■■■ 4.1
Rrp7aQ9D1C9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
Rrp7aQ9D1C9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Rrp7aQ9D1C9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Rrp7aQ9D1C9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Rrp7aQ9D1C9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
Rrp7aQ9D1C9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC40.49■■■■■ 4.07
Rrp7aQ9D1C9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
Rrp7aQ9D1C9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
Rrp7aQ9D1C9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Rrp7aQ9D1C9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC40.41■■■■■ 4.06
Rrp7aQ9D1C9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC40.38■■■■■ 4.06
Rrp7aQ9D1C9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.38■■■■■ 4.05
Rrp7aQ9D1C9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC40.37■■■■■ 4.05
Rrp7aQ9D1C9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC40.3■■■■■ 4.04
Rrp7aQ9D1C9 Zfp131-207ENSMUST00000224946 1783 ntBASIC40.26■■■■■ 4.04
Rrp7aQ9D1C9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC40.25■■■■■ 4.03
Rrp7aQ9D1C9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.03
Rrp7aQ9D1C9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC40.23■■■■■ 4.03
Rrp7aQ9D1C9 Gm16148-201ENSMUST00000119653 893 ntBASIC40.21■■■■■ 4.03
Rrp7aQ9D1C9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC40.21■■■■■ 4.03
Rrp7aQ9D1C9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Rrp7aQ9D1C9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC40.11■■■■■ 4.01
Rrp7aQ9D1C9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
Rrp7aQ9D1C9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC40.08■■■■■ 4.01
Rrp7aQ9D1C9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4.01
Rrp7aQ9D1C9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.07■■■■■ 4
Rrp7aQ9D1C9 Peli2-204ENSMUST00000226513 1320 ntBASIC40.05■■■■■ 4
Rrp7aQ9D1C9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC40.05■■■■■ 4
Rrp7aQ9D1C9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC40.03■■■■■ 4
Rrp7aQ9D1C9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
Rrp7aQ9D1C9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39.96■■■■□ 3.99
Rrp7aQ9D1C9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
Rrp7aQ9D1C9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC39.94■■■■□ 3.98
Rrp7aQ9D1C9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Rrp7aQ9D1C9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
Rrp7aQ9D1C9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
Rrp7aQ9D1C9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC39.89■■■■□ 3.98
Rrp7aQ9D1C9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC39.87■■■■□ 3.97
Rrp7aQ9D1C9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
Rrp7aQ9D1C9 Tdp2-203ENSMUST00000223804 1136 ntBASIC39.85■■■■□ 3.97
Rrp7aQ9D1C9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC39.85■■■■□ 3.97
Rrp7aQ9D1C9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC39.81■■■■□ 3.96
Rrp7aQ9D1C9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Rrp7aQ9D1C9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
Rrp7aQ9D1C9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Rrp7aQ9D1C9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC39.76■■■■□ 3.96
Rrp7aQ9D1C9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.75■■■■□ 3.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms