Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.92■■■□□ 2.54
Rtfdc1Q99K95 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.9■■■□□ 2.54
Rtfdc1Q99K95 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rtfdc1Q99K95 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Rtfdc1Q99K95 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Rtfdc1Q99K95 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Rtfdc1Q99K95 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Rtfdc1Q99K95 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.74■■■□□ 2.51
Rtfdc1Q99K95 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.66■■■□□ 2.5
Rtfdc1Q99K95 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rtfdc1Q99K95 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Rtfdc1Q99K95 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Rtfdc1Q99K95 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.56■■■□□ 2.48
Rtfdc1Q99K95 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Rtfdc1Q99K95 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rtfdc1Q99K95 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.5■■■□□ 2.47
Rtfdc1Q99K95 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rtfdc1Q99K95 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rtfdc1Q99K95 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
Rtfdc1Q99K95 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtfdc1Q99K95 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rtfdc1Q99K95 Gm27322-201ENSMUST00000184007 104 ntBASIC30.42■■■□□ 2.46
Rtfdc1Q99K95 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtfdc1Q99K95 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Rtfdc1Q99K95 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Rtfdc1Q99K95 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rtfdc1Q99K95 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rtfdc1Q99K95 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Rtfdc1Q99K95 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtfdc1Q99K95 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
Rtfdc1Q99K95 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.11■■■□□ 2.41
Rtfdc1Q99K95 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Rtfdc1Q99K95 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Rtfdc1Q99K95 Gm24804-201ENSMUST00000174982 85 ntBASIC30.03■■■□□ 2.4
Rtfdc1Q99K95 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.03■■■□□ 2.4
Rtfdc1Q99K95 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rtfdc1Q99K95 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rtfdc1Q99K95 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtfdc1Q99K95 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30■■■□□ 2.39
Rtfdc1Q99K95 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.98■■■□□ 2.39
Rtfdc1Q99K95 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtfdc1Q99K95 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rtfdc1Q99K95 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rtfdc1Q99K95 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rtfdc1Q99K95 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Rtfdc1Q99K95 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Rtfdc1Q99K95 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rtfdc1Q99K95 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Rtfdc1Q99K95 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.88■■■□□ 2.37
Rtfdc1Q99K95 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rtfdc1Q99K95 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.85■■■□□ 2.37
Rtfdc1Q99K95 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rtfdc1Q99K95 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.84■■■□□ 2.37
Rtfdc1Q99K95 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Rtfdc1Q99K95 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Rtfdc1Q99K95 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.75■■■□□ 2.35
Rtfdc1Q99K95 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rtfdc1Q99K95 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Rtfdc1Q99K95 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rtfdc1Q99K95 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.63■■■□□ 2.33
Rtfdc1Q99K95 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rtfdc1Q99K95 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rtfdc1Q99K95 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Rtfdc1Q99K95 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtfdc1Q99K95 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.54■■■□□ 2.32
Rtfdc1Q99K95 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtfdc1Q99K95 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtfdc1Q99K95 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rtfdc1Q99K95 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rtfdc1Q99K95 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Rtfdc1Q99K95 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtfdc1Q99K95 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Rtfdc1Q99K95 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rtfdc1Q99K95 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Rtfdc1Q99K95 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Rtfdc1Q99K95 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Rtfdc1Q99K95 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Rtfdc1Q99K95 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rtfdc1Q99K95 Mipep-204ENSMUST00000225043 1548 ntBASIC29.32■■■□□ 2.28
Rtfdc1Q99K95 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Rtfdc1Q99K95 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Rtfdc1Q99K95 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Rtfdc1Q99K95 Zfp131-205ENSMUST00000223812 663 ntBASIC29.26■■■□□ 2.27
Rtfdc1Q99K95 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtfdc1Q99K95 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Rtfdc1Q99K95 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Rtfdc1Q99K95 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtfdc1Q99K95 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtfdc1Q99K95 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Rtfdc1Q99K95 Peli2-204ENSMUST00000226513 1320 ntBASIC29.17■■■□□ 2.26
Rtfdc1Q99K95 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rtfdc1Q99K95 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Rtfdc1Q99K95 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Rtfdc1Q99K95 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rtfdc1Q99K95 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rtfdc1Q99K95 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rtfdc1Q99K95 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rtfdc1Q99K95 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Rtfdc1Q99K95 Gm16148-201ENSMUST00000119653 893 ntBASIC29.1■■■□□ 2.25
Rtfdc1Q99K95 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms