Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.52■■■□□ 2.32
Pcdhb2Q91Y00 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdhb2Q91Y00 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdhb2Q91Y00 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.43■■■□□ 2.3
Pcdhb2Q91Y00 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.42■■■□□ 2.3
Pcdhb2Q91Y00 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pcdhb2Q91Y00 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Pcdhb2Q91Y00 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pcdhb2Q91Y00 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdhb2Q91Y00 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.36■■■□□ 2.29
Pcdhb2Q91Y00 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Pcdhb2Q91Y00 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.27■■■□□ 2.28
Pcdhb2Q91Y00 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pcdhb2Q91Y00 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhb2Q91Y00 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Pcdhb2Q91Y00 Gm26115-201ENSMUST00000175605 87 ntBASIC29.2■■■□□ 2.26
Pcdhb2Q91Y00 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb2Q91Y00 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.12■■■□□ 2.25
Pcdhb2Q91Y00 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdhb2Q91Y00 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
Pcdhb2Q91Y00 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhb2Q91Y00 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Pcdhb2Q91Y00 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Pcdhb2Q91Y00 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhb2Q91Y00 Gm8109-201ENSMUST00000194076 746 ntBASIC29.03■■■□□ 2.24
Pcdhb2Q91Y00 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb2Q91Y00 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb2Q91Y00 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.98■■■□□ 2.23
Pcdhb2Q91Y00 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdhb2Q91Y00 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pcdhb2Q91Y00 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pcdhb2Q91Y00 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.92■■■□□ 2.22
Pcdhb2Q91Y00 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pcdhb2Q91Y00 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb2Q91Y00 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Pcdhb2Q91Y00 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
Pcdhb2Q91Y00 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb2Q91Y00 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb2Q91Y00 Gm27322-201ENSMUST00000184007 104 ntBASIC28.86■■■□□ 2.21
Pcdhb2Q91Y00 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Pcdhb2Q91Y00 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhb2Q91Y00 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb2Q91Y00 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb2Q91Y00 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Pcdhb2Q91Y00 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.73■■■□□ 2.19
Pcdhb2Q91Y00 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.72■■■□□ 2.19
Pcdhb2Q91Y00 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb2Q91Y00 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.69■■■□□ 2.18
Pcdhb2Q91Y00 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.66■■■□□ 2.18
Pcdhb2Q91Y00 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.65■■■□□ 2.18
Pcdhb2Q91Y00 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhb2Q91Y00 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhb2Q91Y00 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhb2Q91Y00 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhb2Q91Y00 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Pcdhb2Q91Y00 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb2Q91Y00 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb2Q91Y00 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pcdhb2Q91Y00 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.42■■■□□ 2.14
Pcdhb2Q91Y00 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Pcdhb2Q91Y00 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdhb2Q91Y00 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pcdhb2Q91Y00 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.38■■■□□ 2.13
Pcdhb2Q91Y00 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pcdhb2Q91Y00 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhb2Q91Y00 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Pcdhb2Q91Y00 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhb2Q91Y00 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhb2Q91Y00 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pcdhb2Q91Y00 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pcdhb2Q91Y00 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pcdhb2Q91Y00 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.21■■■□□ 2.11
Pcdhb2Q91Y00 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pcdhb2Q91Y00 Mipep-204ENSMUST00000225043 1548 ntBASIC28.18■■■□□ 2.1
Pcdhb2Q91Y00 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb2Q91Y00 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb2Q91Y00 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb2Q91Y00 Gm24804-201ENSMUST00000174982 85 ntBASIC28.16■■■□□ 2.1
Pcdhb2Q91Y00 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb2Q91Y00 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Pcdhb2Q91Y00 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhb2Q91Y00 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Pcdhb2Q91Y00 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb2Q91Y00 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb2Q91Y00 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb2Q91Y00 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb2Q91Y00 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb2Q91Y00 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb2Q91Y00 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdhb2Q91Y00 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Pcdhb2Q91Y00 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28■■■□□ 2.07
Pcdhb2Q91Y00 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28■■■□□ 2.07
Pcdhb2Q91Y00 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pcdhb2Q91Y00 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhb2Q91Y00 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Pcdhb2Q91Y00 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Pcdhb2Q91Y00 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pcdhb2Q91Y00 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhb2Q91Y00 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Pcdhb2Q91Y00 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.87■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms