Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Trex1Q91XB0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
Trex1Q91XB0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
Trex1Q91XB0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Trex1Q91XB0 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.77■■■□□ 2.84
Trex1Q91XB0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Trex1Q91XB0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Trex1Q91XB0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Trex1Q91XB0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.6■■■□□ 2.81
Trex1Q91XB0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Trex1Q91XB0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
Trex1Q91XB0 Gm27322-201ENSMUST00000184007 104 ntBASIC32.49■■■□□ 2.79
Trex1Q91XB0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Trex1Q91XB0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Trex1Q91XB0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Trex1Q91XB0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
Trex1Q91XB0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Trex1Q91XB0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Trex1Q91XB0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Trex1Q91XB0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.3■■■□□ 2.76
Trex1Q91XB0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Trex1Q91XB0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.26■■■□□ 2.75
Trex1Q91XB0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Trex1Q91XB0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Trex1Q91XB0 Gm24804-201ENSMUST00000174982 85 ntBASIC32.2■■■□□ 2.75
Trex1Q91XB0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Trex1Q91XB0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.11■■■□□ 2.73
Trex1Q91XB0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.09■■■□□ 2.73
Trex1Q91XB0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trex1Q91XB0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trex1Q91XB0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
Trex1Q91XB0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Trex1Q91XB0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Trex1Q91XB0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Trex1Q91XB0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Trex1Q91XB0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Trex1Q91XB0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Trex1Q91XB0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Trex1Q91XB0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Trex1Q91XB0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Trex1Q91XB0 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.87■■■□□ 2.69
Trex1Q91XB0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Trex1Q91XB0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Trex1Q91XB0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.84■■■□□ 2.69
Trex1Q91XB0 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.81■■■□□ 2.68
Trex1Q91XB0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trex1Q91XB0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trex1Q91XB0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Trex1Q91XB0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Trex1Q91XB0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Trex1Q91XB0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trex1Q91XB0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trex1Q91XB0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Trex1Q91XB0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trex1Q91XB0 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.62■■■□□ 2.65
Trex1Q91XB0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.61■■■□□ 2.65
Trex1Q91XB0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trex1Q91XB0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Trex1Q91XB0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Trex1Q91XB0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Trex1Q91XB0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Trex1Q91XB0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Trex1Q91XB0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Trex1Q91XB0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Trex1Q91XB0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trex1Q91XB0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Trex1Q91XB0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Trex1Q91XB0 Zfp131-205ENSMUST00000223812 663 ntBASIC31.4■■■□□ 2.62
Trex1Q91XB0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Trex1Q91XB0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.34■■■□□ 2.61
Trex1Q91XB0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Trex1Q91XB0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Trex1Q91XB0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Trex1Q91XB0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Trex1Q91XB0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.23■■■□□ 2.59
Trex1Q91XB0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Trex1Q91XB0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Trex1Q91XB0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.17■■■□□ 2.58
Trex1Q91XB0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trex1Q91XB0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trex1Q91XB0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Trex1Q91XB0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trex1Q91XB0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Trex1Q91XB0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Trex1Q91XB0 Mipep-204ENSMUST00000225043 1548 ntBASIC31.1■■■□□ 2.57
Trex1Q91XB0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Trex1Q91XB0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Trex1Q91XB0 Peli2-204ENSMUST00000226513 1320 ntBASIC31.08■■■□□ 2.57
Trex1Q91XB0 Gm16148-201ENSMUST00000119653 893 ntBASIC31.08■■■□□ 2.57
Trex1Q91XB0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trex1Q91XB0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.07■■■□□ 2.56
Trex1Q91XB0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Trex1Q91XB0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Trex1Q91XB0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Trex1Q91XB0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Trex1Q91XB0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Trex1Q91XB0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Trex1Q91XB0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.97■■■□□ 2.55
Trex1Q91XB0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Trex1Q91XB0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 181.6 ms