Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm17082-201ENSMUST00000166043 1091 ntBASIC41.1■■■■■ 4.17
Cd109Q8R422 CT025624.2-201ENSMUST00000223609 1909 ntBASIC41.1■■■■■ 4.17
Cd109Q8R422 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41.09■■■■■ 4.17
Cd109Q8R422 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Cd109Q8R422 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC41.01■■■■■ 4.15
Cd109Q8R422 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC40.95■■■■■ 4.15
Cd109Q8R422 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC40.93■■■■■ 4.14
Cd109Q8R422 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC40.81■■■■■ 4.12
Cd109Q8R422 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC40.75■■■■■ 4.11
Cd109Q8R422 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
Cd109Q8R422 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40.65■■■■■ 4.1
Cd109Q8R422 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
Cd109Q8R422 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
Cd109Q8R422 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC40.57■■■■■ 4.08
Cd109Q8R422 Gm27322-201ENSMUST00000184007 104 ntBASIC40.57■■■■■ 4.08
Cd109Q8R422 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.5■■■■■ 4.07
Cd109Q8R422 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40.48■■■■■ 4.07
Cd109Q8R422 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.43■■■■■ 4.06
Cd109Q8R422 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
Cd109Q8R422 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Cd109Q8R422 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40.35■■■■■ 4.05
Cd109Q8R422 Gm24804-201ENSMUST00000174982 85 ntBASIC40.32■■■■■ 4.04
Cd109Q8R422 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.25■■■■■ 4.03
Cd109Q8R422 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
Cd109Q8R422 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
Cd109Q8R422 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
Cd109Q8R422 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Cd109Q8R422 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC40.16■■■■■ 4.02
Cd109Q8R422 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.02
Cd109Q8R422 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
Cd109Q8R422 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC40.12■■■■■ 4.01
Cd109Q8R422 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40.11■■■■■ 4.01
Cd109Q8R422 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.06■■■■■ 4
Cd109Q8R422 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Cd109Q8R422 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40■■■■□ 3.99
Cd109Q8R422 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40■■■■□ 3.99
Cd109Q8R422 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
Cd109Q8R422 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC39.92■■■■□ 3.98
Cd109Q8R422 AL845457.1-201ENSMUST00000197244 68 ntBASIC39.88■■■■□ 3.97
Cd109Q8R422 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC39.87■■■■□ 3.97
Cd109Q8R422 AC166822.3-201ENSMUST00000227394 661 ntBASIC39.86■■■■□ 3.97
Cd109Q8R422 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC39.86■■■■□ 3.97
Cd109Q8R422 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC39.85■■■■□ 3.97
Cd109Q8R422 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Cd109Q8R422 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Cd109Q8R422 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Cd109Q8R422 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Cd109Q8R422 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39.68■■■■□ 3.94
Cd109Q8R422 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
Cd109Q8R422 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39.65■■■■□ 3.94
Cd109Q8R422 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Cd109Q8R422 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
Cd109Q8R422 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
Cd109Q8R422 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
Cd109Q8R422 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
Cd109Q8R422 Zfp131-207ENSMUST00000224946 1783 ntBASIC39.55■■■■□ 3.92
Cd109Q8R422 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Cd109Q8R422 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
Cd109Q8R422 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
Cd109Q8R422 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
Cd109Q8R422 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39.4■■■■□ 3.9
Cd109Q8R422 Zfp131-205ENSMUST00000223812 663 ntBASIC39.37■■■■□ 3.89
Cd109Q8R422 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Cd109Q8R422 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
Cd109Q8R422 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
Cd109Q8R422 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
Cd109Q8R422 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
Cd109Q8R422 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Cd109Q8R422 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Cd109Q8R422 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
Cd109Q8R422 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.15■■■■□ 3.86
Cd109Q8R422 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC39.09■■■■□ 3.85
Cd109Q8R422 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Cd109Q8R422 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Cd109Q8R422 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
Cd109Q8R422 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
Cd109Q8R422 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC39■■■■□ 3.83
Cd109Q8R422 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC38.99■■■■□ 3.83
Cd109Q8R422 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
Cd109Q8R422 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
Cd109Q8R422 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.82
Cd109Q8R422 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC38.93■■■■□ 3.82
Cd109Q8R422 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC38.91■■■■□ 3.82
Cd109Q8R422 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC38.9■■■■□ 3.82
Cd109Q8R422 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
Cd109Q8R422 Peli2-204ENSMUST00000226513 1320 ntBASIC38.89■■■■□ 3.82
Cd109Q8R422 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC38.89■■■■□ 3.82
Cd109Q8R422 Mipep-204ENSMUST00000225043 1548 ntBASIC38.86■■■■□ 3.81
Cd109Q8R422 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Cd109Q8R422 Gm16148-201ENSMUST00000119653 893 ntBASIC38.85■■■■□ 3.81
Cd109Q8R422 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
Cd109Q8R422 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
Cd109Q8R422 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
Cd109Q8R422 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC38.83■■■■□ 3.81
Cd109Q8R422 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC38.82■■■■□ 3.81
Cd109Q8R422 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC38.8■■■■□ 3.8
Cd109Q8R422 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC38.75■■■■□ 3.79
Cd109Q8R422 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
Cd109Q8R422 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC38.71■■■■□ 3.79
Cd109Q8R422 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms