Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdpf1Q8R3A2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdpf1Q8R3A2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdpf1Q8R3A2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.26■■□□□ 1.31
Cdpf1Q8R3A2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdpf1Q8R3A2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Cdpf1Q8R3A2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdpf1Q8R3A2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdpf1Q8R3A2 Zfp131-205ENSMUST00000223812 663 ntBASIC23.15■■□□□ 1.3
Cdpf1Q8R3A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdpf1Q8R3A2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdpf1Q8R3A2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdpf1Q8R3A2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdpf1Q8R3A2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdpf1Q8R3A2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cdpf1Q8R3A2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdpf1Q8R3A2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cdpf1Q8R3A2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.06■■□□□ 1.28
Cdpf1Q8R3A2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cdpf1Q8R3A2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cdpf1Q8R3A2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.99■■□□□ 1.27
Cdpf1Q8R3A2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdpf1Q8R3A2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.98■■□□□ 1.27
Cdpf1Q8R3A2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Cdpf1Q8R3A2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Cdpf1Q8R3A2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cdpf1Q8R3A2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdpf1Q8R3A2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.87■■□□□ 1.25
Cdpf1Q8R3A2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cdpf1Q8R3A2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.84■■□□□ 1.25
Cdpf1Q8R3A2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdpf1Q8R3A2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cdpf1Q8R3A2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cdpf1Q8R3A2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cdpf1Q8R3A2 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.81■■□□□ 1.24
Cdpf1Q8R3A2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Cdpf1Q8R3A2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cdpf1Q8R3A2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cdpf1Q8R3A2 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.77■■□□□ 1.24
Cdpf1Q8R3A2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.76■■□□□ 1.23
Cdpf1Q8R3A2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Cdpf1Q8R3A2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cdpf1Q8R3A2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cdpf1Q8R3A2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cdpf1Q8R3A2 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.73■■□□□ 1.23
Cdpf1Q8R3A2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cdpf1Q8R3A2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cdpf1Q8R3A2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cdpf1Q8R3A2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cdpf1Q8R3A2 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.62■■□□□ 1.21
Cdpf1Q8R3A2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdpf1Q8R3A2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cdpf1Q8R3A2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cdpf1Q8R3A2 Gm16148-201ENSMUST00000119653 893 ntBASIC22.54■■□□□ 1.2
Cdpf1Q8R3A2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdpf1Q8R3A2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Cdpf1Q8R3A2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cdpf1Q8R3A2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdpf1Q8R3A2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.51■■□□□ 1.19
Cdpf1Q8R3A2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cdpf1Q8R3A2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cdpf1Q8R3A2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.48■■□□□ 1.19
Cdpf1Q8R3A2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cdpf1Q8R3A2 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.47■■□□□ 1.19
Cdpf1Q8R3A2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cdpf1Q8R3A2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Cdpf1Q8R3A2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Cdpf1Q8R3A2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdpf1Q8R3A2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.39■■□□□ 1.17
Cdpf1Q8R3A2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cdpf1Q8R3A2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
Cdpf1Q8R3A2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.38■■□□□ 1.17
Cdpf1Q8R3A2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cdpf1Q8R3A2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cdpf1Q8R3A2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cdpf1Q8R3A2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cdpf1Q8R3A2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdpf1Q8R3A2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.3■■□□□ 1.16
Cdpf1Q8R3A2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cdpf1Q8R3A2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdpf1Q8R3A2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.27■■□□□ 1.16
Cdpf1Q8R3A2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdpf1Q8R3A2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdpf1Q8R3A2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdpf1Q8R3A2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cdpf1Q8R3A2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdpf1Q8R3A2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cdpf1Q8R3A2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cdpf1Q8R3A2 Peli2-204ENSMUST00000226513 1320 ntBASIC22.24■■□□□ 1.15
Cdpf1Q8R3A2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdpf1Q8R3A2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Cdpf1Q8R3A2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdpf1Q8R3A2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdpf1Q8R3A2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.2■■□□□ 1.14
Cdpf1Q8R3A2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cdpf1Q8R3A2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdpf1Q8R3A2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdpf1Q8R3A2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdpf1Q8R3A2 Gm45855-201ENSMUST00000212546 880 ntBASIC22.18■■□□□ 1.14
Cdpf1Q8R3A2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms