Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.79■■□□□ 1.72
Vmn1r38Q8R2E1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Vmn1r38Q8R2E1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Vmn1r38Q8R2E1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.68■■□□□ 1.7
Vmn1r38Q8R2E1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Vmn1r38Q8R2E1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Vmn1r38Q8R2E1 Gm25238-201ENSMUST00000174914 89 ntBASIC25.6■■□□□ 1.69
Vmn1r38Q8R2E1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Vmn1r38Q8R2E1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Vmn1r38Q8R2E1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vmn1r38Q8R2E1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vmn1r38Q8R2E1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vmn1r38Q8R2E1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vmn1r38Q8R2E1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vmn1r38Q8R2E1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.49■■□□□ 1.67
Vmn1r38Q8R2E1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.48■■□□□ 1.67
Vmn1r38Q8R2E1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.48■■□□□ 1.67
Vmn1r38Q8R2E1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vmn1r38Q8R2E1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Vmn1r38Q8R2E1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r38Q8R2E1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.42■■□□□ 1.66
Vmn1r38Q8R2E1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r38Q8R2E1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Vmn1r38Q8R2E1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
Vmn1r38Q8R2E1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Vmn1r38Q8R2E1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Vmn1r38Q8R2E1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vmn1r38Q8R2E1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Vmn1r38Q8R2E1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.26■■□□□ 1.63
Vmn1r38Q8R2E1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vmn1r38Q8R2E1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.25■■□□□ 1.63
Vmn1r38Q8R2E1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Vmn1r38Q8R2E1 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.2■■□□□ 1.62
Vmn1r38Q8R2E1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vmn1r38Q8R2E1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vmn1r38Q8R2E1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vmn1r38Q8R2E1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.08■■□□□ 1.61
Vmn1r38Q8R2E1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
Vmn1r38Q8R2E1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.07■■□□□ 1.6
Vmn1r38Q8R2E1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vmn1r38Q8R2E1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Vmn1r38Q8R2E1 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.06■■□□□ 1.6
Vmn1r38Q8R2E1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Vmn1r38Q8R2E1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vmn1r38Q8R2E1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r38Q8R2E1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r38Q8R2E1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vmn1r38Q8R2E1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r38Q8R2E1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Vmn1r38Q8R2E1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Vmn1r38Q8R2E1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vmn1r38Q8R2E1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vmn1r38Q8R2E1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Vmn1r38Q8R2E1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.91■■□□□ 1.58
Vmn1r38Q8R2E1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.89■■□□□ 1.58
Vmn1r38Q8R2E1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.89■■□□□ 1.58
Vmn1r38Q8R2E1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vmn1r38Q8R2E1 Rab21-202ENSMUST00000218831 843 ntBASIC24.88■■□□□ 1.57
Vmn1r38Q8R2E1 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.87■■□□□ 1.57
Vmn1r38Q8R2E1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Vmn1r38Q8R2E1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.85■■□□□ 1.57
Vmn1r38Q8R2E1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vmn1r38Q8R2E1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vmn1r38Q8R2E1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Vmn1r38Q8R2E1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vmn1r38Q8R2E1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Vmn1r38Q8R2E1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.77■■□□□ 1.56
Vmn1r38Q8R2E1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Vmn1r38Q8R2E1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r38Q8R2E1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.75■■□□□ 1.55
Vmn1r38Q8R2E1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vmn1r38Q8R2E1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vmn1r38Q8R2E1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Vmn1r38Q8R2E1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Vmn1r38Q8R2E1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Vmn1r38Q8R2E1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Vmn1r38Q8R2E1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r38Q8R2E1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.69■■□□□ 1.54
Vmn1r38Q8R2E1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Vmn1r38Q8R2E1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Vmn1r38Q8R2E1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vmn1r38Q8R2E1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r38Q8R2E1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r38Q8R2E1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Vmn1r38Q8R2E1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vmn1r38Q8R2E1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Vmn1r38Q8R2E1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.59■■□□□ 1.53
Vmn1r38Q8R2E1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
Vmn1r38Q8R2E1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.56■■□□□ 1.52
Vmn1r38Q8R2E1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Vmn1r38Q8R2E1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Vmn1r38Q8R2E1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r38Q8R2E1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r38Q8R2E1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r38Q8R2E1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vmn1r38Q8R2E1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vmn1r38Q8R2E1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Vmn1r38Q8R2E1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Vmn1r38Q8R2E1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Vmn1r38Q8R2E1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms