Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vmn1r28Q8R2C9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Vmn1r28Q8R2C9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.49■■□□□ 1.67
Vmn1r28Q8R2C9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vmn1r28Q8R2C9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.47■■□□□ 1.67
Vmn1r28Q8R2C9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r28Q8R2C9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vmn1r28Q8R2C9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Vmn1r28Q8R2C9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.44■■□□□ 1.66
Vmn1r28Q8R2C9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Vmn1r28Q8R2C9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Vmn1r28Q8R2C9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Vmn1r28Q8R2C9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
Vmn1r28Q8R2C9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Vmn1r28Q8R2C9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Vmn1r28Q8R2C9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.32■■□□□ 1.64
Vmn1r28Q8R2C9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.3■■□□□ 1.64
Vmn1r28Q8R2C9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Vmn1r28Q8R2C9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Vmn1r28Q8R2C9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Vmn1r28Q8R2C9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.18■■□□□ 1.62
Vmn1r28Q8R2C9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Vmn1r28Q8R2C9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r28Q8R2C9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r28Q8R2C9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Vmn1r28Q8R2C9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Vmn1r28Q8R2C9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vmn1r28Q8R2C9 Gm26115-201ENSMUST00000175605 87 ntBASIC25.07■■□□□ 1.6
Vmn1r28Q8R2C9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vmn1r28Q8R2C9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.05■■□□□ 1.6
Vmn1r28Q8R2C9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r28Q8R2C9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r28Q8R2C9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r28Q8R2C9 Gm8109-201ENSMUST00000194076 746 ntBASIC25■■□□□ 1.59
Vmn1r28Q8R2C9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Vmn1r28Q8R2C9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Vmn1r28Q8R2C9 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.95■■□□□ 1.58
Vmn1r28Q8R2C9 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.92■■□□□ 1.58
Vmn1r28Q8R2C9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Vmn1r28Q8R2C9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.89■■□□□ 1.57
Vmn1r28Q8R2C9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Vmn1r28Q8R2C9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Vmn1r28Q8R2C9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Vmn1r28Q8R2C9 Gm27322-201ENSMUST00000184007 104 ntBASIC24.84■■□□□ 1.57
Vmn1r28Q8R2C9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
Vmn1r28Q8R2C9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vmn1r28Q8R2C9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Vmn1r28Q8R2C9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Vmn1r28Q8R2C9 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.79■■□□□ 1.56
Vmn1r28Q8R2C9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Vmn1r28Q8R2C9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r28Q8R2C9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
Vmn1r28Q8R2C9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Vmn1r28Q8R2C9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Vmn1r28Q8R2C9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.71■■□□□ 1.55
Vmn1r28Q8R2C9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r28Q8R2C9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r28Q8R2C9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Vmn1r28Q8R2C9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Vmn1r28Q8R2C9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vmn1r28Q8R2C9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vmn1r28Q8R2C9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vmn1r28Q8R2C9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Vmn1r28Q8R2C9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vmn1r28Q8R2C9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r28Q8R2C9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.53■■□□□ 1.52
Vmn1r28Q8R2C9 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.51■■□□□ 1.51
Vmn1r28Q8R2C9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Vmn1r28Q8R2C9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r28Q8R2C9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vmn1r28Q8R2C9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Vmn1r28Q8R2C9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Vmn1r28Q8R2C9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Vmn1r28Q8R2C9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Vmn1r28Q8R2C9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vmn1r28Q8R2C9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Vmn1r28Q8R2C9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vmn1r28Q8R2C9 Mipep-204ENSMUST00000225043 1548 ntBASIC24.4■■□□□ 1.5
Vmn1r28Q8R2C9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vmn1r28Q8R2C9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r28Q8R2C9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r28Q8R2C9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Vmn1r28Q8R2C9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
Vmn1r28Q8R2C9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.32■■□□□ 1.48
Vmn1r28Q8R2C9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r28Q8R2C9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vmn1r28Q8R2C9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Vmn1r28Q8R2C9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r28Q8R2C9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r28Q8R2C9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r28Q8R2C9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Vmn1r28Q8R2C9 Gm24804-201ENSMUST00000174982 85 ntBASIC24.21■■□□□ 1.47
Vmn1r28Q8R2C9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Vmn1r28Q8R2C9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r28Q8R2C9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r28Q8R2C9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r28Q8R2C9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.15■■□□□ 1.46
Vmn1r28Q8R2C9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Vmn1r28Q8R2C9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Vmn1r28Q8R2C9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms