Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rpp40Q8R1F9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rpp40Q8R1F9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rpp40Q8R1F9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.11■■■□□ 2.41
Rpp40Q8R1F9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.1■■■□□ 2.41
Rpp40Q8R1F9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.08■■■□□ 2.41
Rpp40Q8R1F9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Rpp40Q8R1F9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.07■■■□□ 2.4
Rpp40Q8R1F9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.03■■■□□ 2.4
Rpp40Q8R1F9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rpp40Q8R1F9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Rpp40Q8R1F9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Rpp40Q8R1F9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Rpp40Q8R1F9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpp40Q8R1F9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.97■■■□□ 2.39
Rpp40Q8R1F9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rpp40Q8R1F9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rpp40Q8R1F9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.84■■■□□ 2.37
Rpp40Q8R1F9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rpp40Q8R1F9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rpp40Q8R1F9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rpp40Q8R1F9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Rpp40Q8R1F9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rpp40Q8R1F9 Gm26115-201ENSMUST00000175605 87 ntBASIC29.72■■■□□ 2.35
Rpp40Q8R1F9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rpp40Q8R1F9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpp40Q8R1F9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
Rpp40Q8R1F9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.64■■■□□ 2.34
Rpp40Q8R1F9 Gm8109-201ENSMUST00000194076 746 ntBASIC29.64■■■□□ 2.34
Rpp40Q8R1F9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Rpp40Q8R1F9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rpp40Q8R1F9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpp40Q8R1F9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Rpp40Q8R1F9 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.58■■■□□ 2.33
Rpp40Q8R1F9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rpp40Q8R1F9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rpp40Q8R1F9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpp40Q8R1F9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpp40Q8R1F9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rpp40Q8R1F9 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.46■■■□□ 2.31
Rpp40Q8R1F9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
Rpp40Q8R1F9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.39■■■□□ 2.3
Rpp40Q8R1F9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Rpp40Q8R1F9 Gm27322-201ENSMUST00000184007 104 ntBASIC29.38■■■□□ 2.29
Rpp40Q8R1F9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Rpp40Q8R1F9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.34■■■□□ 2.29
Rpp40Q8R1F9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rpp40Q8R1F9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Rpp40Q8R1F9 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.29■■■□□ 2.28
Rpp40Q8R1F9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rpp40Q8R1F9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rpp40Q8R1F9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.23■■■□□ 2.27
Rpp40Q8R1F9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Rpp40Q8R1F9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Rpp40Q8R1F9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Rpp40Q8R1F9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rpp40Q8R1F9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rpp40Q8R1F9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rpp40Q8R1F9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rpp40Q8R1F9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.07■■■□□ 2.24
Rpp40Q8R1F9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rpp40Q8R1F9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rpp40Q8R1F9 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.02■■■□□ 2.24
Rpp40Q8R1F9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rpp40Q8R1F9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rpp40Q8R1F9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Rpp40Q8R1F9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rpp40Q8R1F9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rpp40Q8R1F9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rpp40Q8R1F9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Rpp40Q8R1F9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Rpp40Q8R1F9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rpp40Q8R1F9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
Rpp40Q8R1F9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rpp40Q8R1F9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Rpp40Q8R1F9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rpp40Q8R1F9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Rpp40Q8R1F9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.83■■■□□ 2.21
Rpp40Q8R1F9 Mipep-204ENSMUST00000225043 1548 ntBASIC28.81■■■□□ 2.2
Rpp40Q8R1F9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rpp40Q8R1F9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rpp40Q8R1F9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rpp40Q8R1F9 Gm24804-201ENSMUST00000174982 85 ntBASIC28.75■■■□□ 2.19
Rpp40Q8R1F9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rpp40Q8R1F9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Rpp40Q8R1F9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rpp40Q8R1F9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rpp40Q8R1F9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Rpp40Q8R1F9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rpp40Q8R1F9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rpp40Q8R1F9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rpp40Q8R1F9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.6■■■□□ 2.17
Rpp40Q8R1F9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rpp40Q8R1F9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Rpp40Q8R1F9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpp40Q8R1F9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpp40Q8R1F9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.53■■■□□ 2.16
Rpp40Q8R1F9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpp40Q8R1F9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
Rpp40Q8R1F9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms