Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Vopp1Q8R1C3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.76■■■□□ 2.52
Vopp1Q8R1C3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Vopp1Q8R1C3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Vopp1Q8R1C3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Vopp1Q8R1C3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Vopp1Q8R1C3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.63■■■□□ 2.49
Vopp1Q8R1C3 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.59■■■□□ 2.49
Vopp1Q8R1C3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Vopp1Q8R1C3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
Vopp1Q8R1C3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Vopp1Q8R1C3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Vopp1Q8R1C3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.43■■■□□ 2.46
Vopp1Q8R1C3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Vopp1Q8R1C3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Vopp1Q8R1C3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Vopp1Q8R1C3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.35■■■□□ 2.45
Vopp1Q8R1C3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Vopp1Q8R1C3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Vopp1Q8R1C3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Vopp1Q8R1C3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Vopp1Q8R1C3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Vopp1Q8R1C3 Gm27322-201ENSMUST00000184007 104 ntBASIC30.19■■■□□ 2.42
Vopp1Q8R1C3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Vopp1Q8R1C3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Vopp1Q8R1C3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Vopp1Q8R1C3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Vopp1Q8R1C3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
Vopp1Q8R1C3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Vopp1Q8R1C3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Vopp1Q8R1C3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Vopp1Q8R1C3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Vopp1Q8R1C3 Gm24804-201ENSMUST00000174982 85 ntBASIC29.99■■■□□ 2.39
Vopp1Q8R1C3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.99■■■□□ 2.39
Vopp1Q8R1C3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Vopp1Q8R1C3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Vopp1Q8R1C3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Vopp1Q8R1C3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.9■■■□□ 2.38
Vopp1Q8R1C3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Vopp1Q8R1C3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.88■■■□□ 2.37
Vopp1Q8R1C3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Vopp1Q8R1C3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Vopp1Q8R1C3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.84■■■□□ 2.37
Vopp1Q8R1C3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Vopp1Q8R1C3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Vopp1Q8R1C3 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.8■■■□□ 2.36
Vopp1Q8R1C3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Vopp1Q8R1C3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Vopp1Q8R1C3 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.75■■■□□ 2.35
Vopp1Q8R1C3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Vopp1Q8R1C3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Vopp1Q8R1C3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Vopp1Q8R1C3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Vopp1Q8R1C3 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.69■■■□□ 2.34
Vopp1Q8R1C3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Vopp1Q8R1C3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.59■■■□□ 2.33
Vopp1Q8R1C3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Vopp1Q8R1C3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Vopp1Q8R1C3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.52■■■□□ 2.32
Vopp1Q8R1C3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.49■■■□□ 2.31
Vopp1Q8R1C3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Vopp1Q8R1C3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Vopp1Q8R1C3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Vopp1Q8R1C3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Vopp1Q8R1C3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Vopp1Q8R1C3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Vopp1Q8R1C3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Vopp1Q8R1C3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Vopp1Q8R1C3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Vopp1Q8R1C3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Vopp1Q8R1C3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Vopp1Q8R1C3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Vopp1Q8R1C3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Vopp1Q8R1C3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Vopp1Q8R1C3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Vopp1Q8R1C3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Vopp1Q8R1C3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Vopp1Q8R1C3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Vopp1Q8R1C3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Vopp1Q8R1C3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Vopp1Q8R1C3 Zfp131-205ENSMUST00000223812 663 ntBASIC29.13■■■□□ 2.25
Vopp1Q8R1C3 Mipep-204ENSMUST00000225043 1548 ntBASIC29.13■■■□□ 2.25
Vopp1Q8R1C3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Vopp1Q8R1C3 Peli2-204ENSMUST00000226513 1320 ntBASIC29.08■■■□□ 2.25
Vopp1Q8R1C3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Vopp1Q8R1C3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Vopp1Q8R1C3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.05■■■□□ 2.24
Vopp1Q8R1C3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Vopp1Q8R1C3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Vopp1Q8R1C3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Vopp1Q8R1C3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Vopp1Q8R1C3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Vopp1Q8R1C3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Vopp1Q8R1C3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
Vopp1Q8R1C3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.01■■■□□ 2.23
Vopp1Q8R1C3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29■■■□□ 2.23
Vopp1Q8R1C3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Vopp1Q8R1C3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Vopp1Q8R1C3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Vopp1Q8R1C3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms