Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cystm1Q8K353 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cystm1Q8K353 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cystm1Q8K353 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.06■□□□□ 0.32
Cystm1Q8K353 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.05■□□□□ 0.32
Cystm1Q8K353 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cystm1Q8K353 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.01■□□□□ 0.31
Cystm1Q8K353 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17■□□□□ 0.31
Cystm1Q8K353 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cystm1Q8K353 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cystm1Q8K353 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cystm1Q8K353 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cystm1Q8K353 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cystm1Q8K353 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cystm1Q8K353 Gm25238-201ENSMUST00000174914 89 ntBASIC16.92■□□□□ 0.3
Cystm1Q8K353 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cystm1Q8K353 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cystm1Q8K353 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cystm1Q8K353 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cystm1Q8K353 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cystm1Q8K353 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cystm1Q8K353 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cystm1Q8K353 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC16.81■□□□□ 0.28
Cystm1Q8K353 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cystm1Q8K353 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cystm1Q8K353 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cystm1Q8K353 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cystm1Q8K353 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cystm1Q8K353 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cystm1Q8K353 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cystm1Q8K353 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cystm1Q8K353 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cystm1Q8K353 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cystm1Q8K353 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cystm1Q8K353 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cystm1Q8K353 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cystm1Q8K353 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cystm1Q8K353 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cystm1Q8K353 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cystm1Q8K353 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cystm1Q8K353 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cystm1Q8K353 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cystm1Q8K353 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cystm1Q8K353 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cystm1Q8K353 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cystm1Q8K353 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cystm1Q8K353 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cystm1Q8K353 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.61■□□□□ 0.25
Cystm1Q8K353 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cystm1Q8K353 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cystm1Q8K353 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.6■□□□□ 0.25
Cystm1Q8K353 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cystm1Q8K353 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cystm1Q8K353 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cystm1Q8K353 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.55■□□□□ 0.24
Cystm1Q8K353 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cystm1Q8K353 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Cystm1Q8K353 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
Cystm1Q8K353 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cystm1Q8K353 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cystm1Q8K353 Gm27325-201ENSMUST00000175467 74 ntBASIC16.51■□□□□ 0.23
Cystm1Q8K353 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cystm1Q8K353 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cystm1Q8K353 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cystm1Q8K353 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cystm1Q8K353 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC16.47■□□□□ 0.23
Cystm1Q8K353 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.47■□□□□ 0.23
Cystm1Q8K353 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Cystm1Q8K353 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cystm1Q8K353 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cystm1Q8K353 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cystm1Q8K353 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.44■□□□□ 0.22
Cystm1Q8K353 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.43■□□□□ 0.22
Cystm1Q8K353 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cystm1Q8K353 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cystm1Q8K353 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cystm1Q8K353 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cystm1Q8K353 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.39■□□□□ 0.21
Cystm1Q8K353 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Cystm1Q8K353 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cystm1Q8K353 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cystm1Q8K353 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Cystm1Q8K353 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cystm1Q8K353 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cystm1Q8K353 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cystm1Q8K353 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cystm1Q8K353 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cystm1Q8K353 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cystm1Q8K353 Gm25262-201ENSMUST00000174934 133 ntBASIC16.31■□□□□ 0.2
Cystm1Q8K353 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cystm1Q8K353 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cystm1Q8K353 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cystm1Q8K353 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cystm1Q8K353 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cystm1Q8K353 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cystm1Q8K353 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.24■□□□□ 0.19
Cystm1Q8K353 Rab21-202ENSMUST00000218831 843 ntBASIC16.24■□□□□ 0.19
Cystm1Q8K353 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cystm1Q8K353 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cystm1Q8K353 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms