Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pdlim5Q8CI51 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pdlim5Q8CI51 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pdlim5Q8CI51 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.41■■□□□ 1.66
Pdlim5Q8CI51 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
Pdlim5Q8CI51 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pdlim5Q8CI51 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Pdlim5Q8CI51 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pdlim5Q8CI51 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.31■■□□□ 1.64
Pdlim5Q8CI51 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim5Q8CI51 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.27■■□□□ 1.64
Pdlim5Q8CI51 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.22■■□□□ 1.63
Pdlim5Q8CI51 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.21■■□□□ 1.63
Pdlim5Q8CI51 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pdlim5Q8CI51 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.12■■□□□ 1.61
Pdlim5Q8CI51 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pdlim5Q8CI51 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pdlim5Q8CI51 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pdlim5Q8CI51 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pdlim5Q8CI51 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pdlim5Q8CI51 Rab21-202ENSMUST00000218831 843 ntBASIC25.04■■□□□ 1.6
Pdlim5Q8CI51 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pdlim5Q8CI51 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pdlim5Q8CI51 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pdlim5Q8CI51 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pdlim5Q8CI51 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Pdlim5Q8CI51 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.96■■□□□ 1.59
Pdlim5Q8CI51 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pdlim5Q8CI51 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.92■■□□□ 1.58
Pdlim5Q8CI51 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pdlim5Q8CI51 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pdlim5Q8CI51 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pdlim5Q8CI51 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Pdlim5Q8CI51 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pdlim5Q8CI51 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pdlim5Q8CI51 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pdlim5Q8CI51 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.87■■□□□ 1.57
Pdlim5Q8CI51 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Pdlim5Q8CI51 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pdlim5Q8CI51 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pdlim5Q8CI51 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Pdlim5Q8CI51 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.83■■□□□ 1.56
Pdlim5Q8CI51 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.79■■□□□ 1.56
Pdlim5Q8CI51 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pdlim5Q8CI51 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Pdlim5Q8CI51 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.76■■□□□ 1.55
Pdlim5Q8CI51 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pdlim5Q8CI51 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.74■■□□□ 1.55
Pdlim5Q8CI51 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pdlim5Q8CI51 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pdlim5Q8CI51 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pdlim5Q8CI51 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pdlim5Q8CI51 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Pdlim5Q8CI51 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pdlim5Q8CI51 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pdlim5Q8CI51 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.64■■□□□ 1.54
Pdlim5Q8CI51 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pdlim5Q8CI51 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Pdlim5Q8CI51 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pdlim5Q8CI51 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pdlim5Q8CI51 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pdlim5Q8CI51 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pdlim5Q8CI51 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.56■■□□□ 1.52
Pdlim5Q8CI51 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pdlim5Q8CI51 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pdlim5Q8CI51 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pdlim5Q8CI51 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pdlim5Q8CI51 Gm25262-201ENSMUST00000174934 133 ntBASIC24.46■■□□□ 1.51
Pdlim5Q8CI51 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdlim5Q8CI51 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdlim5Q8CI51 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdlim5Q8CI51 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.38■■□□□ 1.49
Pdlim5Q8CI51 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pdlim5Q8CI51 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdlim5Q8CI51 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pdlim5Q8CI51 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pdlim5Q8CI51 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pdlim5Q8CI51 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pdlim5Q8CI51 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
Pdlim5Q8CI51 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pdlim5Q8CI51 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.27■■□□□ 1.48
Pdlim5Q8CI51 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pdlim5Q8CI51 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pdlim5Q8CI51 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pdlim5Q8CI51 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pdlim5Q8CI51 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Pdlim5Q8CI51 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.21■■□□□ 1.47
Pdlim5Q8CI51 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pdlim5Q8CI51 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pdlim5Q8CI51 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pdlim5Q8CI51 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pdlim5Q8CI51 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pdlim5Q8CI51 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.14■■□□□ 1.46
Pdlim5Q8CI51 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pdlim5Q8CI51 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.1■■□□□ 1.45
Pdlim5Q8CI51 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.09■■□□□ 1.45
Pdlim5Q8CI51 Mipep-204ENSMUST00000225043 1548 ntBASIC24.08■■□□□ 1.45
Pdlim5Q8CI51 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pdlim5Q8CI51 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pdlim5Q8CI51 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms