Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Cstf2tQ8C7E9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cstf2tQ8C7E9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.65■■■□□ 2.18
Cstf2tQ8C7E9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.64■■■□□ 2.18
Cstf2tQ8C7E9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Cstf2tQ8C7E9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cstf2tQ8C7E9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cstf2tQ8C7E9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.56■■■□□ 2.16
Cstf2tQ8C7E9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.53■■■□□ 2.16
Cstf2tQ8C7E9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cstf2tQ8C7E9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Cstf2tQ8C7E9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Cstf2tQ8C7E9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cstf2tQ8C7E9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.48■■■□□ 2.15
Cstf2tQ8C7E9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.44■■■□□ 2.14
Cstf2tQ8C7E9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cstf2tQ8C7E9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cstf2tQ8C7E9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cstf2tQ8C7E9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.27■■■□□ 2.12
Cstf2tQ8C7E9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Cstf2tQ8C7E9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cstf2tQ8C7E9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cstf2tQ8C7E9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.21■■■□□ 2.11
Cstf2tQ8C7E9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
Cstf2tQ8C7E9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cstf2tQ8C7E9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.11■■■□□ 2.09
Cstf2tQ8C7E9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Cstf2tQ8C7E9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.09■■■□□ 2.09
Cstf2tQ8C7E9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cstf2tQ8C7E9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cstf2tQ8C7E9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cstf2tQ8C7E9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.02■■■□□ 2.08
Cstf2tQ8C7E9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28■■■□□ 2.07
Cstf2tQ8C7E9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.99■■■□□ 2.07
Cstf2tQ8C7E9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Cstf2tQ8C7E9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.99■■■□□ 2.07
Cstf2tQ8C7E9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Cstf2tQ8C7E9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Cstf2tQ8C7E9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Cstf2tQ8C7E9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Cstf2tQ8C7E9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Cstf2tQ8C7E9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Cstf2tQ8C7E9 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.89■■■□□ 2.06
Cstf2tQ8C7E9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Cstf2tQ8C7E9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Cstf2tQ8C7E9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Cstf2tQ8C7E9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.81■■■□□ 2.04
Cstf2tQ8C7E9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Cstf2tQ8C7E9 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.74■■■□□ 2.03
Cstf2tQ8C7E9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Cstf2tQ8C7E9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Cstf2tQ8C7E9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cstf2tQ8C7E9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.71■■■□□ 2.03
Cstf2tQ8C7E9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cstf2tQ8C7E9 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.7■■■□□ 2.02
Cstf2tQ8C7E9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cstf2tQ8C7E9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Cstf2tQ8C7E9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Cstf2tQ8C7E9 Gm16148-201ENSMUST00000119653 893 ntBASIC27.65■■■□□ 2.02
Cstf2tQ8C7E9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Cstf2tQ8C7E9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Cstf2tQ8C7E9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.61■■■□□ 2.01
Cstf2tQ8C7E9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Cstf2tQ8C7E9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
Cstf2tQ8C7E9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Cstf2tQ8C7E9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cstf2tQ8C7E9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.54■■■□□ 2
Cstf2tQ8C7E9 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.54■■■□□ 2
Cstf2tQ8C7E9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
Cstf2tQ8C7E9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.53■■■□□ 2
Cstf2tQ8C7E9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Cstf2tQ8C7E9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Cstf2tQ8C7E9 Gm45855-201ENSMUST00000212546 880 ntBASIC27.51■■□□□ 1.99
Cstf2tQ8C7E9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cstf2tQ8C7E9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cstf2tQ8C7E9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Cstf2tQ8C7E9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cstf2tQ8C7E9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Cstf2tQ8C7E9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
Cstf2tQ8C7E9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cstf2tQ8C7E9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Cstf2tQ8C7E9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cstf2tQ8C7E9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Cstf2tQ8C7E9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cstf2tQ8C7E9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Cstf2tQ8C7E9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.4■■□□□ 1.98
Cstf2tQ8C7E9 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.38■■□□□ 1.97
Cstf2tQ8C7E9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cstf2tQ8C7E9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cstf2tQ8C7E9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cstf2tQ8C7E9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cstf2tQ8C7E9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Cstf2tQ8C7E9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.34■■□□□ 1.97
Cstf2tQ8C7E9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cstf2tQ8C7E9 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.31■■□□□ 1.96
Cstf2tQ8C7E9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cstf2tQ8C7E9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cstf2tQ8C7E9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cstf2tQ8C7E9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cstf2tQ8C7E9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms