Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.32■■■□□ 2.93
Nek11Q8C0Q4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
Nek11Q8C0Q4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.3■■■□□ 2.92
Nek11Q8C0Q4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
Nek11Q8C0Q4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Nek11Q8C0Q4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Nek11Q8C0Q4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Nek11Q8C0Q4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.15■■■□□ 2.9
Nek11Q8C0Q4 Gm25262-201ENSMUST00000174934 133 ntBASIC33.13■■■□□ 2.89
Nek11Q8C0Q4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Nek11Q8C0Q4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Nek11Q8C0Q4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Nek11Q8C0Q4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.01■■■□□ 2.88
Nek11Q8C0Q4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33■■■□□ 2.87
Nek11Q8C0Q4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Nek11Q8C0Q4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.97■■■□□ 2.87
Nek11Q8C0Q4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Nek11Q8C0Q4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Nek11Q8C0Q4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Nek11Q8C0Q4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
Nek11Q8C0Q4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Nek11Q8C0Q4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
Nek11Q8C0Q4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Nek11Q8C0Q4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Nek11Q8C0Q4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Nek11Q8C0Q4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.73■■■□□ 2.83
Nek11Q8C0Q4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Nek11Q8C0Q4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Nek11Q8C0Q4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Nek11Q8C0Q4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Nek11Q8C0Q4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Nek11Q8C0Q4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.67■■■□□ 2.82
Nek11Q8C0Q4 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.63■■■□□ 2.81
Nek11Q8C0Q4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Nek11Q8C0Q4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Nek11Q8C0Q4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.56■■■□□ 2.8
Nek11Q8C0Q4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
Nek11Q8C0Q4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Nek11Q8C0Q4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Nek11Q8C0Q4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Nek11Q8C0Q4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.46■■■□□ 2.79
Nek11Q8C0Q4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Nek11Q8C0Q4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.38■■■□□ 2.77
Nek11Q8C0Q4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.38■■■□□ 2.77
Nek11Q8C0Q4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Nek11Q8C0Q4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Nek11Q8C0Q4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Nek11Q8C0Q4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Nek11Q8C0Q4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
Nek11Q8C0Q4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Nek11Q8C0Q4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Nek11Q8C0Q4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Nek11Q8C0Q4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Nek11Q8C0Q4 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.2■■■□□ 2.75
Nek11Q8C0Q4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Nek11Q8C0Q4 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.19■■■□□ 2.74
Nek11Q8C0Q4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Nek11Q8C0Q4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Nek11Q8C0Q4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Nek11Q8C0Q4 Gm26115-201ENSMUST00000175605 87 ntBASIC32.08■■■□□ 2.73
Nek11Q8C0Q4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Nek11Q8C0Q4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Nek11Q8C0Q4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Nek11Q8C0Q4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Nek11Q8C0Q4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Nek11Q8C0Q4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Nek11Q8C0Q4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Nek11Q8C0Q4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
Nek11Q8C0Q4 Gm27322-201ENSMUST00000184007 104 ntBASIC32.02■■■□□ 2.72
Nek11Q8C0Q4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Nek11Q8C0Q4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Nek11Q8C0Q4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
Nek11Q8C0Q4 Gm8109-201ENSMUST00000194076 746 ntBASIC32■■■□□ 2.71
Nek11Q8C0Q4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32■■■□□ 2.71
Nek11Q8C0Q4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.99■■■□□ 2.71
Nek11Q8C0Q4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
Nek11Q8C0Q4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
Nek11Q8C0Q4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Nek11Q8C0Q4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.86■■■□□ 2.69
Nek11Q8C0Q4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Nek11Q8C0Q4 Mipep-204ENSMUST00000225043 1548 ntBASIC31.8■■■□□ 2.68
Nek11Q8C0Q4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Nek11Q8C0Q4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Nek11Q8C0Q4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Nek11Q8C0Q4 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.77■■■□□ 2.68
Nek11Q8C0Q4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Nek11Q8C0Q4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Nek11Q8C0Q4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Nek11Q8C0Q4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Nek11Q8C0Q4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
Nek11Q8C0Q4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.62■■■□□ 2.65
Nek11Q8C0Q4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Nek11Q8C0Q4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Nek11Q8C0Q4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.58■■■□□ 2.65
Nek11Q8C0Q4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.57■■■□□ 2.64
Nek11Q8C0Q4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Nek11Q8C0Q4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Nek11Q8C0Q4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Nek11Q8C0Q4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Nek11Q8C0Q4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms