Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40.28■■■■■ 4.04
Usp47Q8BY87 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Usp47Q8BY87 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
Usp47Q8BY87 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC40.22■■■■■ 4.03
Usp47Q8BY87 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Usp47Q8BY87 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC40.17■■■■■ 4.02
Usp47Q8BY87 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC40.17■■■■■ 4.02
Usp47Q8BY87 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC40.12■■■■■ 4.01
Usp47Q8BY87 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC40.11■■■■■ 4.01
Usp47Q8BY87 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC40.1■■■■■ 4.01
Usp47Q8BY87 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC40.05■■■■■ 4
Usp47Q8BY87 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC39.97■■■■□ 3.99
Usp47Q8BY87 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Usp47Q8BY87 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
Usp47Q8BY87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC39.94■■■■□ 3.98
Usp47Q8BY87 Gm26115-201ENSMUST00000175605 87 ntBASIC39.85■■■■□ 3.97
Usp47Q8BY87 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC39.83■■■■□ 3.97
Usp47Q8BY87 Gm8109-201ENSMUST00000194076 746 ntBASIC39.79■■■■□ 3.96
Usp47Q8BY87 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
Usp47Q8BY87 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
Usp47Q8BY87 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
Usp47Q8BY87 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
Usp47Q8BY87 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
Usp47Q8BY87 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC39.71■■■■□ 3.95
Usp47Q8BY87 Gm17082-201ENSMUST00000166043 1091 ntBASIC39.71■■■■□ 3.95
Usp47Q8BY87 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC39.69■■■■□ 3.94
Usp47Q8BY87 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Usp47Q8BY87 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC39.57■■■■□ 3.93
Usp47Q8BY87 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
Usp47Q8BY87 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
Usp47Q8BY87 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
Usp47Q8BY87 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Usp47Q8BY87 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.89
Usp47Q8BY87 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC39.37■■■■□ 3.89
Usp47Q8BY87 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
Usp47Q8BY87 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC39.33■■■■□ 3.89
Usp47Q8BY87 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC39.3■■■■□ 3.88
Usp47Q8BY87 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC39.3■■■■□ 3.88
Usp47Q8BY87 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
Usp47Q8BY87 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC39.28■■■■□ 3.88
Usp47Q8BY87 Zfp131-207ENSMUST00000224946 1783 ntBASIC39.28■■■■□ 3.88
Usp47Q8BY87 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
Usp47Q8BY87 Gm27322-201ENSMUST00000184007 104 ntBASIC39.26■■■■□ 3.88
Usp47Q8BY87 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC39.26■■■■□ 3.88
Usp47Q8BY87 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
Usp47Q8BY87 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
Usp47Q8BY87 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
Usp47Q8BY87 AL845457.1-201ENSMUST00000197244 68 ntBASIC39.12■■■■□ 3.85
Usp47Q8BY87 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC39.11■■■■□ 3.85
Usp47Q8BY87 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Usp47Q8BY87 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC39.04■■■■□ 3.84
Usp47Q8BY87 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC39■■■■□ 3.83
Usp47Q8BY87 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC38.94■■■■□ 3.82
Usp47Q8BY87 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Usp47Q8BY87 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
Usp47Q8BY87 AC166822.3-201ENSMUST00000227394 661 ntBASIC38.83■■■■□ 3.81
Usp47Q8BY87 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Usp47Q8BY87 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
Usp47Q8BY87 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
Usp47Q8BY87 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
Usp47Q8BY87 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Usp47Q8BY87 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
Usp47Q8BY87 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC38.71■■■■□ 3.79
Usp47Q8BY87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
Usp47Q8BY87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
Usp47Q8BY87 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Usp47Q8BY87 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
Usp47Q8BY87 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
Usp47Q8BY87 Gm24804-201ENSMUST00000174982 85 ntBASIC38.6■■■■□ 3.77
Usp47Q8BY87 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Usp47Q8BY87 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC38.59■■■■□ 3.77
Usp47Q8BY87 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC38.59■■■■□ 3.77
Usp47Q8BY87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC38.56■■■■□ 3.76
Usp47Q8BY87 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Usp47Q8BY87 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Usp47Q8BY87 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Usp47Q8BY87 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC38.48■■■■□ 3.75
Usp47Q8BY87 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Usp47Q8BY87 Mipep-204ENSMUST00000225043 1548 ntBASIC38.39■■■■□ 3.74
Usp47Q8BY87 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC38.38■■■■□ 3.73
Usp47Q8BY87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Usp47Q8BY87 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC38.28■■■■□ 3.72
Usp47Q8BY87 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Usp47Q8BY87 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC38.26■■■■□ 3.71
Usp47Q8BY87 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Usp47Q8BY87 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Usp47Q8BY87 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC38.24■■■■□ 3.71
Usp47Q8BY87 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Usp47Q8BY87 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
Usp47Q8BY87 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Usp47Q8BY87 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Usp47Q8BY87 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC38.16■■■■□ 3.7
Usp47Q8BY87 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC38.16■■■■□ 3.7
Usp47Q8BY87 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Usp47Q8BY87 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
Usp47Q8BY87 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Usp47Q8BY87 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC38.05■■■■□ 3.68
Usp47Q8BY87 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
Usp47Q8BY87 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Usp47Q8BY87 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC37.98■■■■□ 3.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms