Protein–RNA interactions for Protein: Q8BW72

Kdm4a, Lysine-specific demethylase 4A, mousemouse

Predictions only

Length 1,064 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4aQ8BW72 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Kdm4aQ8BW72 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Kdm4aQ8BW72 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Kdm4aQ8BW72 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Kdm4aQ8BW72 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Kdm4aQ8BW72 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
Kdm4aQ8BW72 Rab21-202ENSMUST00000218831 843 ntBASIC32.14■■■□□ 2.74
Kdm4aQ8BW72 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Kdm4aQ8BW72 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Kdm4aQ8BW72 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Kdm4aQ8BW72 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Kdm4aQ8BW72 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Kdm4aQ8BW72 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.99■■■□□ 2.71
Kdm4aQ8BW72 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.97■■■□□ 2.71
Kdm4aQ8BW72 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Kdm4aQ8BW72 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.92■■■□□ 2.7
Kdm4aQ8BW72 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Kdm4aQ8BW72 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.84■■■□□ 2.69
Kdm4aQ8BW72 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Kdm4aQ8BW72 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
Kdm4aQ8BW72 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Kdm4aQ8BW72 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Kdm4aQ8BW72 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Kdm4aQ8BW72 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.76■■■□□ 2.67
Kdm4aQ8BW72 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Kdm4aQ8BW72 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Kdm4aQ8BW72 Gm25262-201ENSMUST00000174934 133 ntBASIC31.72■■■□□ 2.67
Kdm4aQ8BW72 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Kdm4aQ8BW72 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Kdm4aQ8BW72 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Kdm4aQ8BW72 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.6■■■□□ 2.65
Kdm4aQ8BW72 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm4aQ8BW72 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Kdm4aQ8BW72 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Kdm4aQ8BW72 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm4aQ8BW72 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Kdm4aQ8BW72 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.55■■■□□ 2.64
Kdm4aQ8BW72 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kdm4aQ8BW72 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Kdm4aQ8BW72 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Kdm4aQ8BW72 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
Kdm4aQ8BW72 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.48■■■□□ 2.63
Kdm4aQ8BW72 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Kdm4aQ8BW72 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Kdm4aQ8BW72 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
Kdm4aQ8BW72 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Kdm4aQ8BW72 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Kdm4aQ8BW72 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Kdm4aQ8BW72 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Kdm4aQ8BW72 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.37■■■□□ 2.61
Kdm4aQ8BW72 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
Kdm4aQ8BW72 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Kdm4aQ8BW72 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Kdm4aQ8BW72 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.28■■■□□ 2.6
Kdm4aQ8BW72 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Kdm4aQ8BW72 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.23■■■□□ 2.59
Kdm4aQ8BW72 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Kdm4aQ8BW72 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Kdm4aQ8BW72 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Kdm4aQ8BW72 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.13■■■□□ 2.57
Kdm4aQ8BW72 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Kdm4aQ8BW72 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.06■■■□□ 2.56
Kdm4aQ8BW72 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Kdm4aQ8BW72 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.01■■■□□ 2.55
Kdm4aQ8BW72 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31■■■□□ 2.55
Kdm4aQ8BW72 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Kdm4aQ8BW72 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Kdm4aQ8BW72 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Kdm4aQ8BW72 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Kdm4aQ8BW72 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Kdm4aQ8BW72 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Kdm4aQ8BW72 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Kdm4aQ8BW72 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Kdm4aQ8BW72 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.82■■■□□ 2.52
Kdm4aQ8BW72 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.82■■■□□ 2.52
Kdm4aQ8BW72 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.81■■■□□ 2.52
Kdm4aQ8BW72 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Kdm4aQ8BW72 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Kdm4aQ8BW72 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Kdm4aQ8BW72 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Kdm4aQ8BW72 Gm26115-201ENSMUST00000175605 87 ntBASIC30.72■■■□□ 2.51
Kdm4aQ8BW72 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Kdm4aQ8BW72 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Kdm4aQ8BW72 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Kdm4aQ8BW72 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Kdm4aQ8BW72 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm4aQ8BW72 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
Kdm4aQ8BW72 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Kdm4aQ8BW72 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Kdm4aQ8BW72 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Kdm4aQ8BW72 Gm27322-201ENSMUST00000184007 104 ntBASIC30.66■■■□□ 2.5
Kdm4aQ8BW72 Gm8109-201ENSMUST00000194076 746 ntBASIC30.66■■■□□ 2.5
Kdm4aQ8BW72 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Kdm4aQ8BW72 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Kdm4aQ8BW72 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Kdm4aQ8BW72 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.64■■■□□ 2.5
Kdm4aQ8BW72 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Kdm4aQ8BW72 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
Kdm4aQ8BW72 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.6■■■□□ 2.49
Kdm4aQ8BW72 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms