Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Col16a1Q8BLX7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Col16a1Q8BLX7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC38.26■■■■□ 3.72
Col16a1Q8BLX7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC38.24■■■■□ 3.71
Col16a1Q8BLX7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC38.19■■■■□ 3.7
Col16a1Q8BLX7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Col16a1Q8BLX7 Gm27322-201ENSMUST00000184007 104 ntBASIC38.16■■■■□ 3.7
Col16a1Q8BLX7 Gm10524-201ENSMUST00000181931 1893 ntBASIC38.16■■■■□ 3.7
Col16a1Q8BLX7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Col16a1Q8BLX7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC38.11■■■■□ 3.69
Col16a1Q8BLX7 Gm42596-201ENSMUST00000196305 1958 ntBASIC38.08■■■■□ 3.69
Col16a1Q8BLX7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Col16a1Q8BLX7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Col16a1Q8BLX7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Col16a1Q8BLX7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Col16a1Q8BLX7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Col16a1Q8BLX7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Col16a1Q8BLX7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC37.97■■■■□ 3.67
Col16a1Q8BLX7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC37.92■■■■□ 3.66
Col16a1Q8BLX7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Col16a1Q8BLX7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC37.79■■■■□ 3.64
Col16a1Q8BLX7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC37.76■■■■□ 3.63
Col16a1Q8BLX7 Zfp131-205ENSMUST00000223812 663 ntBASIC37.68■■■■□ 3.62
Col16a1Q8BLX7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Col16a1Q8BLX7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC37.63■■■■□ 3.62
Col16a1Q8BLX7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC37.62■■■■□ 3.61
Col16a1Q8BLX7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC37.59■■■■□ 3.61
Col16a1Q8BLX7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Col16a1Q8BLX7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC37.51■■■■□ 3.6
Col16a1Q8BLX7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Col16a1Q8BLX7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
Col16a1Q8BLX7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Col16a1Q8BLX7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Col16a1Q8BLX7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
Col16a1Q8BLX7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
Col16a1Q8BLX7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC37.38■■■■□ 3.58
Col16a1Q8BLX7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC37.38■■■■□ 3.57
Col16a1Q8BLX7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Col16a1Q8BLX7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC37.34■■■■□ 3.57
Col16a1Q8BLX7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC37.32■■■■□ 3.57
Col16a1Q8BLX7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Col16a1Q8BLX7 AC166822.3-201ENSMUST00000227394 661 ntBASIC37.27■■■■□ 3.56
Col16a1Q8BLX7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
Col16a1Q8BLX7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC37.21■■■■□ 3.55
Col16a1Q8BLX7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC37.18■■■■□ 3.54
Col16a1Q8BLX7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Col16a1Q8BLX7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
Col16a1Q8BLX7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC37.08■■■■□ 3.53
Col16a1Q8BLX7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Col16a1Q8BLX7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC37.06■■■■□ 3.52
Col16a1Q8BLX7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Col16a1Q8BLX7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Col16a1Q8BLX7 AL845457.1-201ENSMUST00000197244 68 ntBASIC37.04■■■■□ 3.52
Col16a1Q8BLX7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Col16a1Q8BLX7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC37■■■■□ 3.51
Col16a1Q8BLX7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Col16a1Q8BLX7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC36.98■■■■□ 3.51
Col16a1Q8BLX7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Col16a1Q8BLX7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Col16a1Q8BLX7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC36.96■■■■□ 3.51
Col16a1Q8BLX7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Col16a1Q8BLX7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Col16a1Q8BLX7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Col16a1Q8BLX7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
Col16a1Q8BLX7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC36.85■■■■□ 3.49
Col16a1Q8BLX7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC36.82■■■■□ 3.49
Col16a1Q8BLX7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC36.79■■■■□ 3.48
Col16a1Q8BLX7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Col16a1Q8BLX7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Col16a1Q8BLX7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
Col16a1Q8BLX7 Zfp131-207ENSMUST00000224946 1783 ntBASIC36.66■■■■□ 3.46
Col16a1Q8BLX7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Col16a1Q8BLX7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Col16a1Q8BLX7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Col16a1Q8BLX7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC36.59■■■■□ 3.45
Col16a1Q8BLX7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Col16a1Q8BLX7 Gm16148-201ENSMUST00000119653 893 ntBASIC36.57■■■■□ 3.45
Col16a1Q8BLX7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
Col16a1Q8BLX7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
Col16a1Q8BLX7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC36.53■■■■□ 3.44
Col16a1Q8BLX7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC36.51■■■■□ 3.44
Col16a1Q8BLX7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
Col16a1Q8BLX7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC36.5■■■■□ 3.43
Col16a1Q8BLX7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC36.46■■■■□ 3.43
Col16a1Q8BLX7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Col16a1Q8BLX7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
Col16a1Q8BLX7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC36.42■■■■□ 3.42
Col16a1Q8BLX7 Tdp2-203ENSMUST00000223804 1136 ntBASIC36.4■■■■□ 3.42
Col16a1Q8BLX7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Col16a1Q8BLX7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Col16a1Q8BLX7 Peli2-204ENSMUST00000226513 1320 ntBASIC36.35■■■■□ 3.41
Col16a1Q8BLX7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC36.32■■■■□ 3.41
Col16a1Q8BLX7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Col16a1Q8BLX7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
Col16a1Q8BLX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC36.27■■■■□ 3.4
Col16a1Q8BLX7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC36.26■■■■□ 3.39
Col16a1Q8BLX7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Col16a1Q8BLX7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Col16a1Q8BLX7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC36.23■■■■□ 3.39
Col16a1Q8BLX7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms