Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.95■■□□□ 1.42
Srrm4Q8BKA3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Srrm4Q8BKA3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Srrm4Q8BKA3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Srrm4Q8BKA3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Srrm4Q8BKA3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Srrm4Q8BKA3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Srrm4Q8BKA3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Srrm4Q8BKA3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Srrm4Q8BKA3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Srrm4Q8BKA3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Srrm4Q8BKA3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Srrm4Q8BKA3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Srrm4Q8BKA3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Srrm4Q8BKA3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.74■■□□□ 1.39
Srrm4Q8BKA3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.72■■□□□ 1.39
Srrm4Q8BKA3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.72■■□□□ 1.39
Srrm4Q8BKA3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.72■■□□□ 1.39
Srrm4Q8BKA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Srrm4Q8BKA3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Srrm4Q8BKA3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Srrm4Q8BKA3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Srrm4Q8BKA3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Srrm4Q8BKA3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.62■■□□□ 1.37
Srrm4Q8BKA3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Srrm4Q8BKA3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Srrm4Q8BKA3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.54■■□□□ 1.36
Srrm4Q8BKA3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Srrm4Q8BKA3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Srrm4Q8BKA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Srrm4Q8BKA3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Srrm4Q8BKA3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Srrm4Q8BKA3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Srrm4Q8BKA3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Srrm4Q8BKA3 Gm26115-201ENSMUST00000175605 87 ntBASIC23.45■■□□□ 1.34
Srrm4Q8BKA3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Srrm4Q8BKA3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Srrm4Q8BKA3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Srrm4Q8BKA3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Srrm4Q8BKA3 Gm8109-201ENSMUST00000194076 746 ntBASIC23.35■■□□□ 1.33
Srrm4Q8BKA3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.34■■□□□ 1.33
Srrm4Q8BKA3 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Srrm4Q8BKA3 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Srrm4Q8BKA3 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.31■■□□□ 1.32
Srrm4Q8BKA3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Srrm4Q8BKA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Srrm4Q8BKA3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Srrm4Q8BKA3 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Srrm4Q8BKA3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Srrm4Q8BKA3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Srrm4Q8BKA3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Srrm4Q8BKA3 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.22■■□□□ 1.31
Srrm4Q8BKA3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Srrm4Q8BKA3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Srrm4Q8BKA3 Gm27322-201ENSMUST00000184007 104 ntBASIC23.18■■□□□ 1.3
Srrm4Q8BKA3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.18■■□□□ 1.3
Srrm4Q8BKA3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Srrm4Q8BKA3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Srrm4Q8BKA3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Srrm4Q8BKA3 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Srrm4Q8BKA3 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.08■■□□□ 1.29
Srrm4Q8BKA3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Srrm4Q8BKA3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Srrm4Q8BKA3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Srrm4Q8BKA3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.07■■□□□ 1.28
Srrm4Q8BKA3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Srrm4Q8BKA3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Srrm4Q8BKA3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Srrm4Q8BKA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Srrm4Q8BKA3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Srrm4Q8BKA3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Srrm4Q8BKA3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Srrm4Q8BKA3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.94■■□□□ 1.26
Srrm4Q8BKA3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Srrm4Q8BKA3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.91■■□□□ 1.26
Srrm4Q8BKA3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Srrm4Q8BKA3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Srrm4Q8BKA3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Srrm4Q8BKA3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Srrm4Q8BKA3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.88■■□□□ 1.25
Srrm4Q8BKA3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Srrm4Q8BKA3 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.87■■□□□ 1.25
Srrm4Q8BKA3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Srrm4Q8BKA3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Srrm4Q8BKA3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Srrm4Q8BKA3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Srrm4Q8BKA3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Srrm4Q8BKA3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.81■■□□□ 1.24
Srrm4Q8BKA3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Srrm4Q8BKA3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Srrm4Q8BKA3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Srrm4Q8BKA3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Srrm4Q8BKA3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Srrm4Q8BKA3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Srrm4Q8BKA3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Srrm4Q8BKA3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Srrm4Q8BKA3 Mipep-204ENSMUST00000225043 1548 ntBASIC22.72■■□□□ 1.23
Srrm4Q8BKA3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.71■■□□□ 1.23
Srrm4Q8BKA3 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Srrm4Q8BKA3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms