Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Trim23Q8BGX0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim23Q8BGX0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.94■■□□□ 1.9
Trim23Q8BGX0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim23Q8BGX0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim23Q8BGX0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.89■■□□□ 1.9
Trim23Q8BGX0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.89■■□□□ 1.9
Trim23Q8BGX0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim23Q8BGX0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Trim23Q8BGX0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
Trim23Q8BGX0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Trim23Q8BGX0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Trim23Q8BGX0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.73■■□□□ 1.87
Trim23Q8BGX0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Trim23Q8BGX0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.7■■□□□ 1.86
Trim23Q8BGX0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.67■■□□□ 1.86
Trim23Q8BGX0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim23Q8BGX0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Trim23Q8BGX0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Trim23Q8BGX0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim23Q8BGX0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim23Q8BGX0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim23Q8BGX0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim23Q8BGX0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim23Q8BGX0 Gm26115-201ENSMUST00000175605 87 ntBASIC26.55■■□□□ 1.84
Trim23Q8BGX0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Trim23Q8BGX0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim23Q8BGX0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trim23Q8BGX0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim23Q8BGX0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim23Q8BGX0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim23Q8BGX0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Trim23Q8BGX0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim23Q8BGX0 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.45■■□□□ 1.82
Trim23Q8BGX0 Gm8109-201ENSMUST00000194076 746 ntBASIC26.43■■□□□ 1.82
Trim23Q8BGX0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim23Q8BGX0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim23Q8BGX0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim23Q8BGX0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Trim23Q8BGX0 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.35■■□□□ 1.81
Trim23Q8BGX0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim23Q8BGX0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim23Q8BGX0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.3■■□□□ 1.8
Trim23Q8BGX0 Gm27322-201ENSMUST00000184007 104 ntBASIC26.27■■□□□ 1.8
Trim23Q8BGX0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.27■■□□□ 1.8
Trim23Q8BGX0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Trim23Q8BGX0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trim23Q8BGX0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim23Q8BGX0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Trim23Q8BGX0 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.18■■□□□ 1.78
Trim23Q8BGX0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim23Q8BGX0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim23Q8BGX0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.16■■□□□ 1.78
Trim23Q8BGX0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim23Q8BGX0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim23Q8BGX0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trim23Q8BGX0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim23Q8BGX0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim23Q8BGX0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim23Q8BGX0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.03■■□□□ 1.76
Trim23Q8BGX0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim23Q8BGX0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim23Q8BGX0 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.96■■□□□ 1.75
Trim23Q8BGX0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim23Q8BGX0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim23Q8BGX0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim23Q8BGX0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Trim23Q8BGX0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim23Q8BGX0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trim23Q8BGX0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
Trim23Q8BGX0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim23Q8BGX0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim23Q8BGX0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim23Q8BGX0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim23Q8BGX0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim23Q8BGX0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim23Q8BGX0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim23Q8BGX0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trim23Q8BGX0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim23Q8BGX0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trim23Q8BGX0 Mipep-204ENSMUST00000225043 1548 ntBASIC25.76■■□□□ 1.71
Trim23Q8BGX0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.74■■□□□ 1.71
Trim23Q8BGX0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim23Q8BGX0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim23Q8BGX0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim23Q8BGX0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Trim23Q8BGX0 Gm24804-201ENSMUST00000174982 85 ntBASIC25.69■■□□□ 1.7
Trim23Q8BGX0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Trim23Q8BGX0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim23Q8BGX0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim23Q8BGX0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trim23Q8BGX0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Trim23Q8BGX0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim23Q8BGX0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim23Q8BGX0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim23Q8BGX0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.54■■□□□ 1.68
Trim23Q8BGX0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim23Q8BGX0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim23Q8BGX0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim23Q8BGX0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms