Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Otop1Q80VM9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Otop1Q80VM9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Otop1Q80VM9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Otop1Q80VM9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Otop1Q80VM9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Otop1Q80VM9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Otop1Q80VM9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.73■■□□□ 1.87
Otop1Q80VM9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Otop1Q80VM9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Otop1Q80VM9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Otop1Q80VM9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Otop1Q80VM9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Otop1Q80VM9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Otop1Q80VM9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Otop1Q80VM9 Zfp131-205ENSMUST00000223812 663 ntBASIC26.59■■□□□ 1.85
Otop1Q80VM9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.55■■□□□ 1.84
Otop1Q80VM9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Otop1Q80VM9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Otop1Q80VM9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Otop1Q80VM9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Otop1Q80VM9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.45■■□□□ 1.82
Otop1Q80VM9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Otop1Q80VM9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Otop1Q80VM9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Otop1Q80VM9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Otop1Q80VM9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.41■■□□□ 1.82
Otop1Q80VM9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Otop1Q80VM9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Otop1Q80VM9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Otop1Q80VM9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Otop1Q80VM9 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.37■■□□□ 1.81
Otop1Q80VM9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.36■■□□□ 1.81
Otop1Q80VM9 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.33■■□□□ 1.81
Otop1Q80VM9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Otop1Q80VM9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Otop1Q80VM9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Otop1Q80VM9 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.26■■□□□ 1.79
Otop1Q80VM9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.25■■□□□ 1.79
Otop1Q80VM9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.24■■□□□ 1.79
Otop1Q80VM9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Otop1Q80VM9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Otop1Q80VM9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Otop1Q80VM9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Otop1Q80VM9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Otop1Q80VM9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Otop1Q80VM9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Otop1Q80VM9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Otop1Q80VM9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Otop1Q80VM9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Otop1Q80VM9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Otop1Q80VM9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Otop1Q80VM9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Otop1Q80VM9 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.08■■□□□ 1.77
Otop1Q80VM9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Otop1Q80VM9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Otop1Q80VM9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Otop1Q80VM9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Otop1Q80VM9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
Otop1Q80VM9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.01■■□□□ 1.75
Otop1Q80VM9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Otop1Q80VM9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Otop1Q80VM9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Otop1Q80VM9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Otop1Q80VM9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.93■■□□□ 1.74
Otop1Q80VM9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Otop1Q80VM9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Otop1Q80VM9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Otop1Q80VM9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.84■■□□□ 1.73
Otop1Q80VM9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Otop1Q80VM9 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.81■■□□□ 1.72
Otop1Q80VM9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Otop1Q80VM9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Otop1Q80VM9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Otop1Q80VM9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Otop1Q80VM9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.73■■□□□ 1.71
Otop1Q80VM9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Otop1Q80VM9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
Otop1Q80VM9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.7■■□□□ 1.7
Otop1Q80VM9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Otop1Q80VM9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Otop1Q80VM9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Otop1Q80VM9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Otop1Q80VM9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Otop1Q80VM9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Otop1Q80VM9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.64■■□□□ 1.7
Otop1Q80VM9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Otop1Q80VM9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.63■■□□□ 1.69
Otop1Q80VM9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Otop1Q80VM9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Otop1Q80VM9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Otop1Q80VM9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Otop1Q80VM9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.61■■□□□ 1.69
Otop1Q80VM9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Otop1Q80VM9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Otop1Q80VM9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Otop1Q80VM9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Otop1Q80VM9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Otop1Q80VM9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Otop1Q80VM9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms