Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Prdm4Q80V63 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Prdm4Q80V63 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Prdm4Q80V63 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Prdm4Q80V63 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.12■■■□□ 2.09
Prdm4Q80V63 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Prdm4Q80V63 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Prdm4Q80V63 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Prdm4Q80V63 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Prdm4Q80V63 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Prdm4Q80V63 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.03■■■□□ 2.08
Prdm4Q80V63 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Prdm4Q80V63 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Prdm4Q80V63 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Prdm4Q80V63 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.97■■■□□ 2.07
Prdm4Q80V63 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Prdm4Q80V63 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.06
Prdm4Q80V63 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Prdm4Q80V63 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Prdm4Q80V63 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Prdm4Q80V63 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Prdm4Q80V63 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Prdm4Q80V63 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Prdm4Q80V63 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.86■■■□□ 2.05
Prdm4Q80V63 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Prdm4Q80V63 Gm25238-201ENSMUST00000174914 89 ntBASIC27.8■■■□□ 2.04
Prdm4Q80V63 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Prdm4Q80V63 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Prdm4Q80V63 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Prdm4Q80V63 Gm27325-201ENSMUST00000175467 74 ntBASIC27.72■■■□□ 2.03
Prdm4Q80V63 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Prdm4Q80V63 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
Prdm4Q80V63 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Prdm4Q80V63 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Prdm4Q80V63 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Prdm4Q80V63 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
Prdm4Q80V63 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Prdm4Q80V63 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Prdm4Q80V63 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Prdm4Q80V63 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Prdm4Q80V63 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.58■■■□□ 2.01
Prdm4Q80V63 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.57■■■□□ 2
Prdm4Q80V63 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Prdm4Q80V63 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.54■■■□□ 2
Prdm4Q80V63 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Prdm4Q80V63 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.53■■■□□ 2
Prdm4Q80V63 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Prdm4Q80V63 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Prdm4Q80V63 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Prdm4Q80V63 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
Prdm4Q80V63 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Prdm4Q80V63 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Prdm4Q80V63 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Prdm4Q80V63 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Prdm4Q80V63 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Prdm4Q80V63 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Prdm4Q80V63 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prdm4Q80V63 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Prdm4Q80V63 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Prdm4Q80V63 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Prdm4Q80V63 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Prdm4Q80V63 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Prdm4Q80V63 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Prdm4Q80V63 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.26■■□□□ 1.95
Prdm4Q80V63 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Prdm4Q80V63 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Prdm4Q80V63 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Prdm4Q80V63 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prdm4Q80V63 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.21■■□□□ 1.95
Prdm4Q80V63 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Prdm4Q80V63 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Prdm4Q80V63 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Prdm4Q80V63 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.17■■□□□ 1.94
Prdm4Q80V63 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.17■■□□□ 1.94
Prdm4Q80V63 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC27.16■■□□□ 1.94
Prdm4Q80V63 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Prdm4Q80V63 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Prdm4Q80V63 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.11■■□□□ 1.93
Prdm4Q80V63 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prdm4Q80V63 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.1■■□□□ 1.93
Prdm4Q80V63 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prdm4Q80V63 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
Prdm4Q80V63 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Prdm4Q80V63 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Prdm4Q80V63 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prdm4Q80V63 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Prdm4Q80V63 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Prdm4Q80V63 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Prdm4Q80V63 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Prdm4Q80V63 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Prdm4Q80V63 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Prdm4Q80V63 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Prdm4Q80V63 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Prdm4Q80V63 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Prdm4Q80V63 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Prdm4Q80V63 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Prdm4Q80V63 Rab21-202ENSMUST00000218831 843 ntBASIC26.93■■□□□ 1.9
Prdm4Q80V63 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Prdm4Q80V63 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Prdm4Q80V63 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms