Protein–RNA interactions for Protein: Q80TR4

Slit1, Slit homolog 1 protein, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slit1Q80TR4 Gm24804-201ENSMUST00000174982 85 ntBASIC37.31■■■■□ 3.56
Slit1Q80TR4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Slit1Q80TR4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Slit1Q80TR4 Gm27322-201ENSMUST00000184007 104 ntBASIC37.25■■■■□ 3.55
Slit1Q80TR4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Slit1Q80TR4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC37.24■■■■□ 3.55
Slit1Q80TR4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Slit1Q80TR4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.54
Slit1Q80TR4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC37.13■■■■□ 3.53
Slit1Q80TR4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
Slit1Q80TR4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Slit1Q80TR4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.53
Slit1Q80TR4 Gm42596-201ENSMUST00000196305 1958 ntBASIC37.05■■■■□ 3.52
Slit1Q80TR4 Gm10524-201ENSMUST00000181931 1893 ntBASIC37.05■■■■□ 3.52
Slit1Q80TR4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Slit1Q80TR4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Slit1Q80TR4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36.92■■■■□ 3.5
Slit1Q80TR4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Slit1Q80TR4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Slit1Q80TR4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.73■■■■□ 3.47
Slit1Q80TR4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC36.71■■■■□ 3.47
Slit1Q80TR4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Slit1Q80TR4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.64■■■■□ 3.46
Slit1Q80TR4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36.64■■■■□ 3.46
Slit1Q80TR4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
Slit1Q80TR4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36.58■■■■□ 3.45
Slit1Q80TR4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Slit1Q80TR4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Slit1Q80TR4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC36.53■■■■□ 3.44
Slit1Q80TR4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Slit1Q80TR4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Slit1Q80TR4 Zfp131-205ENSMUST00000223812 663 ntBASIC36.52■■■■□ 3.44
Slit1Q80TR4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
Slit1Q80TR4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Slit1Q80TR4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Slit1Q80TR4 AC166822.3-201ENSMUST00000227394 661 ntBASIC36.47■■■■□ 3.43
Slit1Q80TR4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Slit1Q80TR4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
Slit1Q80TR4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Slit1Q80TR4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Slit1Q80TR4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
Slit1Q80TR4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC36.4■■■■□ 3.42
Slit1Q80TR4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Slit1Q80TR4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
Slit1Q80TR4 AL845457.1-201ENSMUST00000197244 68 ntBASIC36.32■■■■□ 3.4
Slit1Q80TR4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36.3■■■■□ 3.4
Slit1Q80TR4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36.25■■■■□ 3.39
Slit1Q80TR4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Slit1Q80TR4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC36.18■■■■□ 3.38
Slit1Q80TR4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
Slit1Q80TR4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC36.03■■■■□ 3.36
Slit1Q80TR4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Slit1Q80TR4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Slit1Q80TR4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Slit1Q80TR4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Slit1Q80TR4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC35.97■■■■□ 3.35
Slit1Q80TR4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Slit1Q80TR4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Slit1Q80TR4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Slit1Q80TR4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.35
Slit1Q80TR4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Slit1Q80TR4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.92■■■■□ 3.34
Slit1Q80TR4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Slit1Q80TR4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.88■■■■□ 3.33
Slit1Q80TR4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Slit1Q80TR4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Slit1Q80TR4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC35.83■■■■□ 3.33
Slit1Q80TR4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Slit1Q80TR4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Slit1Q80TR4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Slit1Q80TR4 Zfp131-207ENSMUST00000224946 1783 ntBASIC35.73■■■■□ 3.31
Slit1Q80TR4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC35.7■■■■□ 3.31
Slit1Q80TR4 Gm16148-201ENSMUST00000119653 893 ntBASIC35.69■■■■□ 3.3
Slit1Q80TR4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Slit1Q80TR4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
Slit1Q80TR4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC35.65■■■■□ 3.3
Slit1Q80TR4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Slit1Q80TR4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
Slit1Q80TR4 Peli2-204ENSMUST00000226513 1320 ntBASIC35.57■■■■□ 3.28
Slit1Q80TR4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC35.56■■■■□ 3.28
Slit1Q80TR4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
Slit1Q80TR4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Slit1Q80TR4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
Slit1Q80TR4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Slit1Q80TR4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC35.5■■■■□ 3.27
Slit1Q80TR4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC35.47■■■■□ 3.27
Slit1Q80TR4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Slit1Q80TR4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Slit1Q80TR4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
Slit1Q80TR4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Slit1Q80TR4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Slit1Q80TR4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Slit1Q80TR4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Slit1Q80TR4 Tdp2-203ENSMUST00000223804 1136 ntBASIC35.42■■■■□ 3.26
Slit1Q80TR4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35.38■■■■□ 3.25
Slit1Q80TR4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
Slit1Q80TR4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC35.36■■■■□ 3.25
Slit1Q80TR4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Slit1Q80TR4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC35.32■■■■□ 3.25
Slit1Q80TR4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms