Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rif1Q6PR54 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rif1Q6PR54 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.71■■□□□ 1.55
Rif1Q6PR54 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.71■■□□□ 1.55
Rif1Q6PR54 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Rif1Q6PR54 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.68■■□□□ 1.54
Rif1Q6PR54 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.64■■□□□ 1.53
Rif1Q6PR54 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.63■■□□□ 1.53
Rif1Q6PR54 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.63■■□□□ 1.53
Rif1Q6PR54 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rif1Q6PR54 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Rif1Q6PR54 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
Rif1Q6PR54 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.42■■□□□ 1.5
Rif1Q6PR54 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rif1Q6PR54 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rif1Q6PR54 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.39■■□□□ 1.5
Rif1Q6PR54 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rif1Q6PR54 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Rif1Q6PR54 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.31■■□□□ 1.48
Rif1Q6PR54 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Rif1Q6PR54 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rif1Q6PR54 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rif1Q6PR54 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rif1Q6PR54 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rif1Q6PR54 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rif1Q6PR54 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.23■■□□□ 1.47
Rif1Q6PR54 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rif1Q6PR54 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rif1Q6PR54 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.2■■□□□ 1.46
Rif1Q6PR54 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Rif1Q6PR54 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rif1Q6PR54 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rif1Q6PR54 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Rif1Q6PR54 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Rif1Q6PR54 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rif1Q6PR54 Gm45855-201ENSMUST00000212546 880 ntBASIC24.12■■□□□ 1.45
Rif1Q6PR54 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rif1Q6PR54 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rif1Q6PR54 Gm16148-201ENSMUST00000119653 893 ntBASIC24.08■■□□□ 1.45
Rif1Q6PR54 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rif1Q6PR54 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Rif1Q6PR54 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rif1Q6PR54 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rif1Q6PR54 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rif1Q6PR54 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.02■■□□□ 1.44
Rif1Q6PR54 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.02■■□□□ 1.44
Rif1Q6PR54 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Rif1Q6PR54 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.01■■□□□ 1.43
Rif1Q6PR54 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24■■□□□ 1.43
Rif1Q6PR54 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24■■□□□ 1.43
Rif1Q6PR54 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Rif1Q6PR54 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Rif1Q6PR54 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rif1Q6PR54 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rif1Q6PR54 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Rif1Q6PR54 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rif1Q6PR54 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rif1Q6PR54 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rif1Q6PR54 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rif1Q6PR54 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rif1Q6PR54 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rif1Q6PR54 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Rif1Q6PR54 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rif1Q6PR54 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.84■■□□□ 1.41
Rif1Q6PR54 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rif1Q6PR54 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rif1Q6PR54 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rif1Q6PR54 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rif1Q6PR54 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rif1Q6PR54 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rif1Q6PR54 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Rif1Q6PR54 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.75■■□□□ 1.39
Rif1Q6PR54 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Rif1Q6PR54 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rif1Q6PR54 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rif1Q6PR54 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rif1Q6PR54 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rif1Q6PR54 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.68■■□□□ 1.38
Rif1Q6PR54 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.67■■□□□ 1.38
Rif1Q6PR54 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.64■■□□□ 1.38
Rif1Q6PR54 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rif1Q6PR54 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Rif1Q6PR54 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rif1Q6PR54 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rif1Q6PR54 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rif1Q6PR54 Gm15039-201ENSMUST00000118914 875 ntBASIC23.56■■□□□ 1.36
Rif1Q6PR54 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rif1Q6PR54 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rif1Q6PR54 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rif1Q6PR54 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.51■■□□□ 1.35
Rif1Q6PR54 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rif1Q6PR54 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rif1Q6PR54 Gm9397-201ENSMUST00000200125 605 ntBASIC23.48■■□□□ 1.35
Rif1Q6PR54 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rif1Q6PR54 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rif1Q6PR54 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rif1Q6PR54 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rif1Q6PR54 Gm8503-201ENSMUST00000118131 455 ntBASIC23.45■■□□□ 1.34
Rif1Q6PR54 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.45■■□□□ 1.34
Rif1Q6PR54 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms