Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ndufa4Q62425 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndufa4Q62425 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufa4Q62425 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa4Q62425 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ndufa4Q62425 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndufa4Q62425 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.71■□□□□ 0.75
Ndufa4Q62425 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufa4Q62425 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndufa4Q62425 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.62■□□□□ 0.73
Ndufa4Q62425 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.61■□□□□ 0.73
Ndufa4Q62425 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ndufa4Q62425 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndufa4Q62425 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndufa4Q62425 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.56■□□□□ 0.72
Ndufa4Q62425 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndufa4Q62425 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndufa4Q62425 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndufa4Q62425 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndufa4Q62425 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndufa4Q62425 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ndufa4Q62425 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufa4Q62425 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.47■□□□□ 0.71
Ndufa4Q62425 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufa4Q62425 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufa4Q62425 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.4■□□□□ 0.7
Ndufa4Q62425 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.38■□□□□ 0.69
Ndufa4Q62425 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufa4Q62425 Gm27325-201ENSMUST00000175467 74 ntBASIC19.32■□□□□ 0.68
Ndufa4Q62425 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndufa4Q62425 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ndufa4Q62425 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufa4Q62425 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ndufa4Q62425 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ndufa4Q62425 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ndufa4Q62425 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ndufa4Q62425 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ndufa4Q62425 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ndufa4Q62425 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.22■□□□□ 0.67
Ndufa4Q62425 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ndufa4Q62425 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ndufa4Q62425 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndufa4Q62425 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ndufa4Q62425 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ndufa4Q62425 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ndufa4Q62425 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ndufa4Q62425 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ndufa4Q62425 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ndufa4Q62425 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ndufa4Q62425 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.13■□□□□ 0.65
Ndufa4Q62425 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ndufa4Q62425 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ndufa4Q62425 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ndufa4Q62425 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ndufa4Q62425 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.08■□□□□ 0.65
Ndufa4Q62425 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufa4Q62425 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufa4Q62425 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ndufa4Q62425 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndufa4Q62425 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ndufa4Q62425 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.04■□□□□ 0.64
Ndufa4Q62425 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ndufa4Q62425 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ndufa4Q62425 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ndufa4Q62425 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa4Q62425 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa4Q62425 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa4Q62425 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufa4Q62425 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufa4Q62425 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufa4Q62425 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.93■□□□□ 0.62
Ndufa4Q62425 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ndufa4Q62425 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.92■□□□□ 0.62
Ndufa4Q62425 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufa4Q62425 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufa4Q62425 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufa4Q62425 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa4Q62425 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa4Q62425 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufa4Q62425 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.9■□□□□ 0.62
Ndufa4Q62425 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufa4Q62425 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.89■□□□□ 0.61
Ndufa4Q62425 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa4Q62425 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa4Q62425 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufa4Q62425 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufa4Q62425 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufa4Q62425 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.85■□□□□ 0.61
Ndufa4Q62425 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa4Q62425 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufa4Q62425 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ndufa4Q62425 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndufa4Q62425 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
Ndufa4Q62425 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.81■□□□□ 0.6
Ndufa4Q62425 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.8■□□□□ 0.6
Ndufa4Q62425 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.79■□□□□ 0.6
Ndufa4Q62425 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufa4Q62425 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ndufa4Q62425 Zxda-201ENSMUST00000117281 2621 ntBASIC18.76■□□□□ 0.59
Ndufa4Q62425 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms