Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cmc4Q61908 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cmc4Q61908 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cmc4Q61908 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmc4Q61908 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cmc4Q61908 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.1■□□□□ 0.81
Cmc4Q61908 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cmc4Q61908 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.08■□□□□ 0.81
Cmc4Q61908 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.08■□□□□ 0.81
Cmc4Q61908 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cmc4Q61908 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.07■□□□□ 0.8
Cmc4Q61908 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cmc4Q61908 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cmc4Q61908 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cmc4Q61908 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cmc4Q61908 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
Cmc4Q61908 Gm26115-201ENSMUST00000175605 87 ntBASIC19.98■□□□□ 0.79
Cmc4Q61908 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cmc4Q61908 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cmc4Q61908 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cmc4Q61908 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cmc4Q61908 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cmc4Q61908 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cmc4Q61908 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cmc4Q61908 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Cmc4Q61908 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cmc4Q61908 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cmc4Q61908 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cmc4Q61908 Gm27322-201ENSMUST00000184007 104 ntBASIC19.8■□□□□ 0.76
Cmc4Q61908 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cmc4Q61908 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cmc4Q61908 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cmc4Q61908 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cmc4Q61908 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cmc4Q61908 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cmc4Q61908 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cmc4Q61908 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cmc4Q61908 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.74■□□□□ 0.75
Cmc4Q61908 Gm8109-201ENSMUST00000194076 746 ntBASIC19.73■□□□□ 0.75
Cmc4Q61908 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.73■□□□□ 0.75
Cmc4Q61908 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cmc4Q61908 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.72■□□□□ 0.75
Cmc4Q61908 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cmc4Q61908 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Cmc4Q61908 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cmc4Q61908 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cmc4Q61908 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.61■□□□□ 0.73
Cmc4Q61908 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cmc4Q61908 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.59■□□□□ 0.73
Cmc4Q61908 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.58■□□□□ 0.73
Cmc4Q61908 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cmc4Q61908 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cmc4Q61908 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.57■□□□□ 0.72
Cmc4Q61908 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cmc4Q61908 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cmc4Q61908 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cmc4Q61908 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.49■□□□□ 0.71
Cmc4Q61908 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cmc4Q61908 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cmc4Q61908 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cmc4Q61908 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cmc4Q61908 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cmc4Q61908 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cmc4Q61908 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cmc4Q61908 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cmc4Q61908 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cmc4Q61908 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.39■□□□□ 0.69
Cmc4Q61908 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cmc4Q61908 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cmc4Q61908 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cmc4Q61908 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cmc4Q61908 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cmc4Q61908 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cmc4Q61908 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cmc4Q61908 Mipep-204ENSMUST00000225043 1548 ntBASIC19.29■□□□□ 0.68
Cmc4Q61908 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cmc4Q61908 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cmc4Q61908 Gm24804-201ENSMUST00000174982 85 ntBASIC19.24■□□□□ 0.67
Cmc4Q61908 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cmc4Q61908 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cmc4Q61908 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cmc4Q61908 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cmc4Q61908 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.2■□□□□ 0.66
Cmc4Q61908 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cmc4Q61908 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cmc4Q61908 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cmc4Q61908 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cmc4Q61908 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cmc4Q61908 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cmc4Q61908 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cmc4Q61908 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cmc4Q61908 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cmc4Q61908 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cmc4Q61908 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cmc4Q61908 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cmc4Q61908 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cmc4Q61908 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cmc4Q61908 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cmc4Q61908 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cmc4Q61908 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms