Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lrrk1Q3UHC2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.23■■□□□ 1.79
Lrrk1Q3UHC2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Lrrk1Q3UHC2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lrrk1Q3UHC2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Lrrk1Q3UHC2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.17■■□□□ 1.78
Lrrk1Q3UHC2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.16■■□□□ 1.78
Lrrk1Q3UHC2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Lrrk1Q3UHC2 Gm8109-201ENSMUST00000194076 746 ntBASIC26.15■■□□□ 1.78
Lrrk1Q3UHC2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Lrrk1Q3UHC2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.14■■□□□ 1.77
Lrrk1Q3UHC2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Lrrk1Q3UHC2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Lrrk1Q3UHC2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Lrrk1Q3UHC2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lrrk1Q3UHC2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lrrk1Q3UHC2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lrrk1Q3UHC2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lrrk1Q3UHC2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.01■■□□□ 1.75
Lrrk1Q3UHC2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lrrk1Q3UHC2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lrrk1Q3UHC2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lrrk1Q3UHC2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Lrrk1Q3UHC2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Lrrk1Q3UHC2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Lrrk1Q3UHC2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lrrk1Q3UHC2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.83■■□□□ 1.73
Lrrk1Q3UHC2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Lrrk1Q3UHC2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Lrrk1Q3UHC2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Lrrk1Q3UHC2 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.77■■□□□ 1.72
Lrrk1Q3UHC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Lrrk1Q3UHC2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.72■■□□□ 1.71
Lrrk1Q3UHC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Lrrk1Q3UHC2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Lrrk1Q3UHC2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Lrrk1Q3UHC2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.64■■□□□ 1.69
Lrrk1Q3UHC2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lrrk1Q3UHC2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Lrrk1Q3UHC2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
Lrrk1Q3UHC2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.56■■□□□ 1.68
Lrrk1Q3UHC2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lrrk1Q3UHC2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Lrrk1Q3UHC2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.5■■□□□ 1.67
Lrrk1Q3UHC2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Lrrk1Q3UHC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Lrrk1Q3UHC2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lrrk1Q3UHC2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.4■■□□□ 1.66
Lrrk1Q3UHC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Lrrk1Q3UHC2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lrrk1Q3UHC2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Lrrk1Q3UHC2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Lrrk1Q3UHC2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lrrk1Q3UHC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lrrk1Q3UHC2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lrrk1Q3UHC2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Lrrk1Q3UHC2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.31■■□□□ 1.64
Lrrk1Q3UHC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lrrk1Q3UHC2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lrrk1Q3UHC2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lrrk1Q3UHC2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Lrrk1Q3UHC2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lrrk1Q3UHC2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lrrk1Q3UHC2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lrrk1Q3UHC2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Lrrk1Q3UHC2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.23■■□□□ 1.63
Lrrk1Q3UHC2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lrrk1Q3UHC2 Gm27322-201ENSMUST00000184007 104 ntBASIC25.18■■□□□ 1.62
Lrrk1Q3UHC2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lrrk1Q3UHC2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Lrrk1Q3UHC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Lrrk1Q3UHC2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Lrrk1Q3UHC2 Gm24804-201ENSMUST00000174982 85 ntBASIC25.08■■□□□ 1.61
Lrrk1Q3UHC2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Lrrk1Q3UHC2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Lrrk1Q3UHC2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrk1Q3UHC2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.03■■□□□ 1.6
Lrrk1Q3UHC2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lrrk1Q3UHC2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Lrrk1Q3UHC2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Lrrk1Q3UHC2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Lrrk1Q3UHC2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Lrrk1Q3UHC2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Lrrk1Q3UHC2 Mipep-204ENSMUST00000225043 1548 ntBASIC24.97■■□□□ 1.59
Lrrk1Q3UHC2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Lrrk1Q3UHC2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Lrrk1Q3UHC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Lrrk1Q3UHC2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Lrrk1Q3UHC2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.94■■□□□ 1.58
Lrrk1Q3UHC2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Lrrk1Q3UHC2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Lrrk1Q3UHC2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Lrrk1Q3UHC2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Lrrk1Q3UHC2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Lrrk1Q3UHC2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrk1Q3UHC2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Lrrk1Q3UHC2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
Lrrk1Q3UHC2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Lrrk1Q3UHC2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Lrrk1Q3UHC2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms