Protein–RNA interactions for Protein: Q3TRG0

Gm1604b, Gene model 1604B, (NCBI), mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm1604bQ3TRG0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Gm1604bQ3TRG0 Gm8109-201ENSMUST00000194076 746 ntBASIC27.07■■□□□ 1.92
Gm1604bQ3TRG0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gm1604bQ3TRG0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gm1604bQ3TRG0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Gm1604bQ3TRG0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.02■■□□□ 1.92
Gm1604bQ3TRG0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Gm1604bQ3TRG0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.98■■□□□ 1.91
Gm1604bQ3TRG0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.97■■□□□ 1.91
Gm1604bQ3TRG0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Gm1604bQ3TRG0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.91■■□□□ 1.9
Gm1604bQ3TRG0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.9■■□□□ 1.9
Gm1604bQ3TRG0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gm1604bQ3TRG0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
Gm1604bQ3TRG0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.86■■□□□ 1.89
Gm1604bQ3TRG0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.85■■□□□ 1.89
Gm1604bQ3TRG0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gm1604bQ3TRG0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Gm1604bQ3TRG0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Gm1604bQ3TRG0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Gm1604bQ3TRG0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Gm1604bQ3TRG0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Gm1604bQ3TRG0 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.68■■□□□ 1.86
Gm1604bQ3TRG0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Gm1604bQ3TRG0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Gm1604bQ3TRG0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.59■■□□□ 1.85
Gm1604bQ3TRG0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Gm1604bQ3TRG0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Gm1604bQ3TRG0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Gm1604bQ3TRG0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Gm1604bQ3TRG0 Gm27322-201ENSMUST00000184007 104 ntBASIC26.49■■□□□ 1.83
Gm1604bQ3TRG0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Gm1604bQ3TRG0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Gm1604bQ3TRG0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Gm1604bQ3TRG0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.42■■□□□ 1.82
Gm1604bQ3TRG0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Gm1604bQ3TRG0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Gm1604bQ3TRG0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Gm1604bQ3TRG0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Gm1604bQ3TRG0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gm1604bQ3TRG0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gm1604bQ3TRG0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Gm1604bQ3TRG0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Gm1604bQ3TRG0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Gm1604bQ3TRG0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Gm1604bQ3TRG0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.22■■□□□ 1.79
Gm1604bQ3TRG0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Gm1604bQ3TRG0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm1604bQ3TRG0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm1604bQ3TRG0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm1604bQ3TRG0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.21■■□□□ 1.79
Gm1604bQ3TRG0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.19■■□□□ 1.78
Gm1604bQ3TRG0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
Gm1604bQ3TRG0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.18■■□□□ 1.78
Gm1604bQ3TRG0 Gm24804-201ENSMUST00000174982 85 ntBASIC26.17■■□□□ 1.78
Gm1604bQ3TRG0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Gm1604bQ3TRG0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.16■■□□□ 1.78
Gm1604bQ3TRG0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Gm1604bQ3TRG0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Gm1604bQ3TRG0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Gm1604bQ3TRG0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Gm1604bQ3TRG0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Gm1604bQ3TRG0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Gm1604bQ3TRG0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Gm1604bQ3TRG0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Gm1604bQ3TRG0 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.04■■□□□ 1.76
Gm1604bQ3TRG0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Gm1604bQ3TRG0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26■■□□□ 1.75
Gm1604bQ3TRG0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26■■□□□ 1.75
Gm1604bQ3TRG0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Gm1604bQ3TRG0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Gm1604bQ3TRG0 Zxda-201ENSMUST00000117281 2621 ntBASIC25.99■■□□□ 1.75
Gm1604bQ3TRG0 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.96■■□□□ 1.75
Gm1604bQ3TRG0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Gm1604bQ3TRG0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.93■■□□□ 1.74
Gm1604bQ3TRG0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Gm1604bQ3TRG0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Gm1604bQ3TRG0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Gm1604bQ3TRG0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Gm1604bQ3TRG0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Gm1604bQ3TRG0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Gm1604bQ3TRG0 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.84■■□□□ 1.73
Gm1604bQ3TRG0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Gm1604bQ3TRG0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Gm1604bQ3TRG0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Gm1604bQ3TRG0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Gm1604bQ3TRG0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Gm1604bQ3TRG0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Gm1604bQ3TRG0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Gm1604bQ3TRG0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Gm1604bQ3TRG0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.74■■□□□ 1.71
Gm1604bQ3TRG0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm1604bQ3TRG0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Gm1604bQ3TRG0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Gm1604bQ3TRG0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Gm1604bQ3TRG0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Gm1604bQ3TRG0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Gm1604bQ3TRG0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Gm1604bQ3TRG0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.64■■□□□ 1.69
Gm1604bQ3TRG0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms