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Protein–RNA interactions for Protein: Q07660
BRE4, Protein BRE4, yeast
Predictions only
Length
1,125 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (RIP-Chip)
Gene
UniProt Accession
Gene
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
Detected Interaction
BRE4
Q07660
RTF1
YGL244W
1677 nt
11.3
□□□□□ -0.6
BRE4
Q07660
YHL050C
YHL050C
2094 nt
11.28
□□□□□ -0.6
BRE4
Q07660
WWM1
YFL010C
636 nt
11.28
□□□□□ -0.6
BRE4
Q07660
YKL097C
YKL097C
411 nt
11.26
□□□□□ -0.61
BRE4
Q07660
SIS1
YNL007C
1059 nt
11.26
□□□□□ -0.61
BRE4
Q07660
CCT6
YDR188W
1641 nt
11.26
□□□□□ -0.61
BRE4
Q07660
TRM9
YML014W
840 nt
11.25
□□□□□ -0.61
BRE4
Q07660
FPS1
YLL043W
2010 nt
11.23
□□□□□ -0.61
BRE4
Q07660
YAL037C-B
YAL037C-B
975 nt
11.23
□□□□□ -0.61
BRE4
Q07660
RTS2
YOR077W
699 nt
11.21
□□□□□ -0.61
BRE4
Q07660
GFD2
YCL036W
1701 nt
11.19
□□□□□ -0.62
BRE4
Q07660
YGR139W
YGR139W
339 nt
11.19
□□□□□ -0.62
BRE4
Q07660
LSM3
YLR438C-A
270 nt
11.19
□□□□□ -0.62
BRE4
Q07660
RRT12
YCR045C
1476 nt
11.18
□□□□□ -0.62
BRE4
Q07660
YGR021W
YGR021W
873 nt
11.17
□□□□□ -0.62
BRE4
Q07660
ART5
YGR068C
1761 nt
11.16
□□□□□ -0.62
BRE4
Q07660
BOP3
YNL042W
1191 nt
11.15
□□□□□ -0.62
BRE4
Q07660
PTK1
YKL198C
1989 nt
11.14
□□□□□ -0.63
BRE4
Q07660
HOM6
YJR139C
1080 nt
11.13
□□□□□ -0.63
BRE4
Q07660
YFL021C-A
YFL021C-A
855 nt
11.11
□□□□□ -0.63
BRE4
Q07660
SUF2
tP(AGG)C
72 nt
11.09
□□□□□ -0.63
BRE4
Q07660
SUF10
tP(AGG)N
72 nt
11.09
□□□□□ -0.63
BRE4
Q07660
MNP1
YGL068W
585 nt
11.03
□□□□□ -0.64
BRE4
Q07660
CUE1
YMR264W
612 nt
11.03
□□□□□ -0.64
BRE4
Q07660
PET9
YBL030C
957 nt
11.01
□□□□□ -0.65
BRE4
Q07660
YNL195C
YNL195C
786 nt
11.01
□□□□□ -0.65
BRE4
Q07660
BOR1
YNL275W
1731 nt
11
□□□□□ -0.65
BRE4
Q07660
RKM5
YLR137W
1104 nt
10.96
□□□□□ -0.65
BRE4
Q07660
UME6
YDR207C
2511 nt
10.94
□□□□□ -0.66
BRE4
Q07660
TIR4
YOR009W
1464 nt
10.93
□□□□□ -0.66
BRE4
Q07660
YIL100W
YIL100W
354 nt
10.91
□□□□□ -0.66
BRE4
Q07660
NCP1
YHR042W
2076 nt
10.91
□□□□□ -0.66
BRE4
Q07660
YFL054C
YFL054C
1941 nt
10.9
□□□□□ -0.66
BRE4
Q07660
YCH1
YGR203W
447 nt
10.88
□□□□□ -0.67
BRE4
Q07660
SPT8
YLR055C
1809 nt
10.84
□□□□□ -0.67
BRE4
Q07660
YOR139C
YOR139C
393 nt
10.84
□□□□□ -0.67
BRE4
Q07660
YMR057C
YMR057C
372 nt
10.82
□□□□□ -0.68
BRE4
Q07660
YOL037C
YOL037C
354 nt
10.81
□□□□□ -0.68
BRE4
Q07660
NPL3
YDR432W
1245 nt
10.77
□□□□□ -0.69
BRE4
Q07660
YLR236C
YLR236C
324 nt
10.73
□□□□□ -0.69
BRE4
Q07660
MCH5
YOR306C
1566 nt
10.68
□□□□□ -0.7
BRE4
Q07660
HSP60
YLR259C
1719 nt
10.67
□□□□□ -0.7
BRE4
Q07660
LCB1
YMR296C
1677 nt
10.66
□□□□□ -0.7
BRE4
Q07660
YLR154C-G
YLR154C-G
150 nt
10.63
□□□□□ -0.71
BRE4
Q07660
SWE1
YJL187C
2460 nt
10.62
□□□□□ -0.71
BRE4
Q07660
ALG12
YNR030W
1656 nt
10.59
□□□□□ -0.71
BRE4
Q07660
YLR281C
YLR281C
468 nt
10.58
□□□□□ -0.72
BRE4
Q07660
WHI5
YOR083W
888 nt
10.57
□□□□□ -0.72
BRE4
Q07660
YJL152W
YJL152W
360 nt
10.55
□□□□□ -0.72
BRE4
Q07660
NME1
NME1
340 nt
10.51
□□□□□ -0.73
BRE4
Q07660
GLK1
YCL040W
1503 nt
10.49
□□□□□ -0.73
BRE4
Q07660
RPM1
RPM1
483 nt
10.49
□□□□□ -0.73
BRE4
Q07660
YCL048W-A
YCL048W-A
240 nt
10.49
□□□□□ -0.73
BRE4
Q07660
FRE6
YLL051C
2139 nt
10.48
□□□□□ -0.73
BRE4
Q07660
tM(CAU)C
tM(CAU)C
72 nt
10.45
□□□□□ -0.74
BRE4
Q07660
IMT4
tM(CAU)E
72 nt
10.45
□□□□□ -0.74
BRE4
Q07660
IMT3
tM(CAU)J3
72 nt
10.45
□□□□□ -0.74
BRE4
Q07660
IMT1
tM(CAU)O1
72 nt
10.45
□□□□□ -0.74
BRE4
Q07660
IMT2
tM(CAU)P
72 nt
10.45
□□□□□ -0.74
BRE4
Q07660
PUS2
YGL063W
1113 nt
10.43
□□□□□ -0.74
BRE4
Q07660
LYS4
YDR234W
2082 nt
10.43
□□□□□ -0.74
BRE4
Q07660
RRD1
YIL153W
1182 nt
10.42
□□□□□ -0.74
BRE4
Q07660
YJL225C
YJL225C
5277 nt
10.39
□□□□□ -0.75
BRE4
Q07660
SIM1
YIL123W
1431 nt
10.37
□□□□□ -0.75
BRE4
Q07660
FUR4
YBR021W
1902 nt
10.35
□□□□□ -0.75
BRE4
Q07660
IMP2'
YIL154C
1041 nt
10.34
□□□□□ -0.75
BRE4
Q07660
IDH1
YNL037C
1083 nt
10.33
□□□□□ -0.76
BRE4
Q07660
DED1
YOR204W
1815 nt
10.33
□□□□□ -0.76
BRE4
Q07660
NAR1
YNL240C
1476 nt
10.32
□□□□□ -0.76
BRE4
Q07660
DSK2
YMR276W
1122 nt
10.32
□□□□□ -0.76
BRE4
Q07660
FMP52
YER004W
696 nt
10.3
□□□□□ -0.76
BRE4
Q07660
YPR011C
YPR011C
981 nt
10.29
□□□□□ -0.76
BRE4
Q07660
FMT1
YBL013W
1206 nt
10.28
□□□□□ -0.76
BRE4
Q07660
BIO4
YNR057C
714 nt
10.28
□□□□□ -0.76
BRE4
Q07660
GBP2
YCL011C
1284 nt
10.28
□□□□□ -0.76
BRE4
Q07660
PCM1
YEL058W
1674 nt
10.28
□□□□□ -0.76
BRE4
Q07660
PRP4
YPR178W
1398 nt
10.26
□□□□□ -0.77
BRE4
Q07660
RDN37-1
RDN37-1
5354 nt
10.26
□□□□□ -0.77
BRE4
Q07660
RDN37-2
RDN37-2
5354 nt
10.26
□□□□□ -0.77
BRE4
Q07660
AAC1
YMR056C
930 nt
10.25
□□□□□ -0.77
BRE4
Q07660
YEL076C-A
YEL076C-A
651 nt
10.21
□□□□□ -0.77
BRE4
Q07660
YEL076C
YEL076C
651 nt
10.21
□□□□□ -0.77
BRE4
Q07660
YLR464W
YLR464W
651 nt
10.21
□□□□□ -0.77
BRE4
Q07660
DPS1
YLL018C
1674 nt
10.2
□□□□□ -0.78
BRE4
Q07660
TCD2
YKL027W
1344 nt
10.18
□□□□□ -0.78
BRE4
Q07660
FMP45
YDL222C
930 nt
10.17
□□□□□ -0.78
BRE4
Q07660
YDR433W
YDR433W
441 nt
10.17
□□□□□ -0.78
BRE4
Q07660
ADH2
YMR303C
1047 nt
10.17
□□□□□ -0.78
BRE4
Q07660
CCA1
YER168C
1641 nt
10.16
□□□□□ -0.78
BRE4
Q07660
YHR056W-A
YHR056W-A
435 nt
10.16
□□□□□ -0.78
BRE4
Q07660
BIO5
YNR056C
1686 nt
10.15
□□□□□ -0.79
BRE4
Q07660
ERV46
YAL042W
1248 nt
10.14
□□□□□ -0.79
BRE4
Q07660
LPX1
YOR084W
1164 nt
10.12
□□□□□ -0.79
BRE4
Q07660
MXR2
YCL033C
507 nt
10.11
□□□□□ -0.79
BRE4
Q07660
SOR2
YDL246C
1074 nt
10.1
□□□□□ -0.79
BRE4
Q07660
SNF6
YHL025W
999 nt
10.1
□□□□□ -0.79
BRE4
Q07660
SOR1
YJR159W
1074 nt
10.1
□□□□□ -0.79
BRE4
Q07660
CWP1
YKL096W
720 nt
10.1
□□□□□ -0.79
BRE4
Q07660
CRR1
YLR213C
1269 nt
10.1
□□□□□ -0.79
BRE4
Q07660
SNF1
YDR477W
1902 nt
10.09
□□□□□ -0.79
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Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms