Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 SIS1YNL007C 1059 nt10.5□□□□□ -0.73
BER1Q06688 CCT6YDR188W 1641 nt10.47□□□□□ -0.73
BER1Q06688 SUF2tP(AGG)C 72 nt10.45□□□□□ -0.74
BER1Q06688 SUF10tP(AGG)N 72 nt10.45□□□□□ -0.74
BER1Q06688 PIB2YGL023C 1908 nt10.45□□□□□ -0.74
BER1Q06688 YSC84YHR016C 1407 nt10.43□□□□□ -0.74
BER1Q06688 LSM3YLR438C-A 270 nt10.43□□□□□ -0.74
BER1Q06688 GFD2YCL036W 1701 nt10.39□□□□□ -0.75
BER1Q06688 YHL050CYHL050C 2094 nt10.37□□□□□ -0.75
BER1Q06688 ART5YGR068C 1761 nt10.37□□□□□ -0.75
BER1Q06688 RTF1YGL244W 1677 nt10.34□□□□□ -0.75
BER1Q06688 WWM1YFL010C 636 nt10.34□□□□□ -0.75
BER1Q06688 RTS2YOR077W 699 nt10.33□□□□□ -0.76
BER1Q06688 PET9YBL030C 957 nt10.29□□□□□ -0.76
BER1Q06688 RRT12YCR045C 1476 nt10.28□□□□□ -0.76
BER1Q06688 CUE1YMR264W 612 nt10.26□□□□□ -0.77
BER1Q06688 PST2YDR032C 597 nt10.25□□□□□ -0.77
BER1Q06688 BOP3YNL042W 1191 nt10.25□□□□□ -0.77
BER1Q06688 YFL021C-AYFL021C-A 855 nt10.23□□□□□ -0.77
BER1Q06688 YGR021WYGR021W 873 nt10.22□□□□□ -0.77
BER1Q06688 MOT3YMR070W 1473 nt10.22□□□□□ -0.77
BER1Q06688 PTK1YKL198C 1989 nt10.2□□□□□ -0.78
BER1Q06688 YCH1YGR203W 447 nt10.19□□□□□ -0.78
BER1Q06688 YNL195CYNL195C 786 nt10.19□□□□□ -0.78
BER1Q06688 TIR4YOR009W 1464 nt10.13□□□□□ -0.79
BER1Q06688 YIL100WYIL100W 354 nt10.12□□□□□ -0.79
BER1Q06688 YMR057CYMR057C 372 nt10.08□□□□□ -0.8
BER1Q06688 NCP1YHR042W 2076 nt10.06□□□□□ -0.8
BER1Q06688 HOM6YJR139C 1080 nt10.05□□□□□ -0.8
BER1Q06688 YLR236CYLR236C 324 nt10.02□□□□□ -0.81
BER1Q06688 UME6YDR207C 2511 nt10.02□□□□□ -0.81
BER1Q06688 YFL054CYFL054C 1941 nt9.97□□□□□ -0.81
BER1Q06688 BOR1YNL275W 1731 nt9.94□□□□□ -0.82
BER1Q06688 SPT8YLR055C 1809 nt9.93□□□□□ -0.82
BER1Q06688 RKM5YLR137W 1104 nt9.91□□□□□ -0.82
BER1Q06688 SHU1YHL006C 453 nt9.9□□□□□ -0.82
BER1Q06688 MNP1YGL068W 585 nt9.89□□□□□ -0.83
BER1Q06688 YAL037C-BYAL037C-B 975 nt9.89□□□□□ -0.83
BER1Q06688 NPL3YDR432W 1245 nt9.86□□□□□ -0.83
BER1Q06688 LCB1YMR296C 1677 nt9.84□□□□□ -0.83
BER1Q06688 YCL048W-AYCL048W-A 240 nt9.82□□□□□ -0.84
BER1Q06688 YJL152WYJL152W 360 nt9.79□□□□□ -0.84
BER1Q06688 YLR154C-GYLR154C-G 150 nt9.75□□□□□ -0.85
BER1Q06688 SWE1YJL187C 2460 nt9.73□□□□□ -0.85
BER1Q06688 HSP60YLR259C 1719 nt9.7□□□□□ -0.86
BER1Q06688 LYS4YDR234W 2082 nt9.65□□□□□ -0.86
BER1Q06688 YOL037CYOL037C 354 nt9.65□□□□□ -0.86
BER1Q06688 SIM1YIL123W 1431 nt9.63□□□□□ -0.87
BER1Q06688 YKL097CYKL097C 411 nt9.62□□□□□ -0.87
BER1Q06688 RRD1YIL153W 1182 nt9.6□□□□□ -0.87
BER1Q06688 ALG12YNR030W 1656 nt9.6□□□□□ -0.87
BER1Q06688 FMP52YER004W 696 nt9.59□□□□□ -0.87
BER1Q06688 PCM1YEL058W 1674 nt9.58□□□□□ -0.88
BER1Q06688 GLK1YCL040W 1503 nt9.57□□□□□ -0.88
BER1Q06688 MCH5YOR306C 1566 nt9.56□□□□□ -0.88
BER1Q06688 BIO4YNR057C 714 nt9.51□□□□□ -0.89
BER1Q06688 IDH1YNL037C 1083 nt9.5□□□□□ -0.89
BER1Q06688 DED1YOR204W 1815 nt9.48□□□□□ -0.89
BER1Q06688 FUR4YBR021W 1902 nt9.48□□□□□ -0.89
BER1Q06688 FMT1YBL013W 1206 nt9.46□□□□□ -0.9
BER1Q06688 GBP2YCL011C 1284 nt9.46□□□□□ -0.9
BER1Q06688 SNF6YHL025W 999 nt9.44□□□□□ -0.9
BER1Q06688 TCD2YKL027W 1344 nt9.44□□□□□ -0.9
BER1Q06688 ADH2YMR303C 1047 nt9.43□□□□□ -0.9
BER1Q06688 WHI5YOR083W 888 nt9.43□□□□□ -0.9
BER1Q06688 ERF2YLR246W 1080 nt9.42□□□□□ -0.9
BER1Q06688 YHR056W-AYHR056W-A 435 nt9.41□□□□□ -0.9
BER1Q06688 CRR1YLR213C 1269 nt9.41□□□□□ -0.9
BER1Q06688 CWP1YKL096W 720 nt9.4□□□□□ -0.9
BER1Q06688 YLR281CYLR281C 468 nt9.39□□□□□ -0.91
BER1Q06688 PRP4YPR178W 1398 nt9.38□□□□□ -0.91
BER1Q06688 IMP2'YIL154C 1041 nt9.38□□□□□ -0.91
BER1Q06688 DSK2YMR276W 1122 nt9.38□□□□□ -0.91
BER1Q06688 CCA1YER168C 1641 nt9.35□□□□□ -0.91
BER1Q06688 YEL076C-AYEL076C-A 651 nt9.35□□□□□ -0.91
BER1Q06688 YEL076CYEL076C 651 nt9.35□□□□□ -0.91
BER1Q06688 YLR464WYLR464W 651 nt9.35□□□□□ -0.91
BER1Q06688 AAC1YMR056C 930 nt9.35□□□□□ -0.91
BER1Q06688 DPS1YLL018C 1674 nt9.32□□□□□ -0.92
BER1Q06688 RAX1YOR301W 1308 nt9.32□□□□□ -0.92
BER1Q06688 HEM12YDR047W 1089 nt9.32□□□□□ -0.92
BER1Q06688 YIH1YCR059C 777 nt9.31□□□□□ -0.92
BER1Q06688 MIC10YCL057C-A 294 nt9.31□□□□□ -0.92
BER1Q06688 NAR1YNL240C 1476 nt9.31□□□□□ -0.92
BER1Q06688 SOR2YDL246C 1074 nt9.29□□□□□ -0.92
BER1Q06688 SOR1YJR159W 1074 nt9.29□□□□□ -0.92
BER1Q06688 YLL053CYLL053C 459 nt9.28□□□□□ -0.92
BER1Q06688 ATF2YGR177C 1608 nt9.27□□□□□ -0.93
BER1Q06688 SNG1YGR197C 1644 nt9.25□□□□□ -0.93
BER1Q06688 RPM1RPM1 483 nt9.25□□□□□ -0.93
BER1Q06688 YCL042WYCL042W 360 nt9.25□□□□□ -0.93
BER1Q06688 RNQ1YCL028W 1218 nt9.24□□□□□ -0.93
BER1Q06688 BMT6YLR063W 1098 nt9.23□□□□□ -0.93
BER1Q06688 YOR139CYOR139C 393 nt9.23□□□□□ -0.93
BER1Q06688 YFL067WYFL067W 528 nt9.22□□□□□ -0.93
BER1Q06688 BIO5YNR056C 1686 nt9.22□□□□□ -0.93
BER1Q06688 YKR005CYKR005C 1578 nt9.21□□□□□ -0.93
BER1Q06688 SNF1YDR477W 1902 nt9.19□□□□□ -0.94
BER1Q06688 YDR433WYDR433W 441 nt9.19□□□□□ -0.94
BER1Q06688 MXR2YCL033C 507 nt9.19□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms