Protein–RNA interactions for Protein: Q05942

RSA3, Ribosome assembly protein 3, yeastyeast

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSA3Q05942 BOP3YNL042W 1191 nt11.78□□□□□ -0.52
RSA3Q05942 PTK1YKL198C 1989 nt11.77□□□□□ -0.53
RSA3Q05942 ALF1YNL148C 765 nt11.76□□□□□ -0.53
RSA3Q05942 BDH2YAL061W 1254 nt11.73□□□□□ -0.53
RSA3Q05942 FUN26YAL022C 1554 nt11.72□□□□□ -0.53
RSA3Q05942 SRB2YHR041C 633 nt11.69□□□□□ -0.54
RSA3Q05942 RRT12YCR045C 1476 nt11.65□□□□□ -0.54
RSA3Q05942 WWM1YFL010C 636 nt11.59□□□□□ -0.55
RSA3Q05942 YGR021WYGR021W 873 nt11.59□□□□□ -0.55
RSA3Q05942 TRM9YML014W 840 nt11.59□□□□□ -0.55
RSA3Q05942 SIS1YNL007C 1059 nt11.59□□□□□ -0.55
RSA3Q05942 RTS2YOR077W 699 nt11.58□□□□□ -0.56
RSA3Q05942 LSM3YLR438C-A 270 nt11.57□□□□□ -0.56
RSA3Q05942 GFD2YCL036W 1701 nt11.57□□□□□ -0.56
RSA3Q05942 SHU1YHL006C 453 nt11.56□□□□□ -0.56
RSA3Q05942 MCH5YOR306C 1566 nt11.54□□□□□ -0.56
RSA3Q05942 YNL195CYNL195C 786 nt11.53□□□□□ -0.56
RSA3Q05942 ART5YGR068C 1761 nt11.51□□□□□ -0.57
RSA3Q05942 YFL054CYFL054C 1941 nt11.5□□□□□ -0.57
RSA3Q05942 YFL021C-AYFL021C-A 855 nt11.5□□□□□ -0.57
RSA3Q05942 YKL097CYKL097C 411 nt11.5□□□□□ -0.57
RSA3Q05942 SPT8YLR055C 1809 nt11.47□□□□□ -0.57
RSA3Q05942 SUF2tP(AGG)C 72 nt11.46□□□□□ -0.57
RSA3Q05942 SUF10tP(AGG)N 72 nt11.46□□□□□ -0.57
RSA3Q05942 CCT6YDR188W 1641 nt11.46□□□□□ -0.58
RSA3Q05942 CUE1YMR264W 612 nt11.45□□□□□ -0.58
RSA3Q05942 NCP1YHR042W 2076 nt11.44□□□□□ -0.58
RSA3Q05942 HOM6YJR139C 1080 nt11.42□□□□□ -0.58
RSA3Q05942 YAL037C-BYAL037C-B 975 nt11.42□□□□□ -0.58
RSA3Q05942 ALG12YNR030W 1656 nt11.38□□□□□ -0.59
RSA3Q05942 YJL225CYJL225C 5277 nt11.38□□□□□ -0.59
RSA3Q05942 HSP60YLR259C 1719 nt11.38□□□□□ -0.59
RSA3Q05942 PET9YBL030C 957 nt11.36□□□□□ -0.59
RSA3Q05942 NME1NME1 340 nt11.35□□□□□ -0.59
RSA3Q05942 YIL100WYIL100W 354 nt11.33□□□□□ -0.6
RSA3Q05942 MNP1YGL068W 585 nt11.29□□□□□ -0.6
RSA3Q05942 RKM5YLR137W 1104 nt11.27□□□□□ -0.61
RSA3Q05942 YGR139WYGR139W 339 nt11.25□□□□□ -0.61
RSA3Q05942 YCH1YGR203W 447 nt11.21□□□□□ -0.61
RSA3Q05942 SWE1YJL187C 2460 nt11.19□□□□□ -0.62
RSA3Q05942 GLK1YCL040W 1503 nt11.16□□□□□ -0.62
RSA3Q05942 YOL037CYOL037C 354 nt11.15□□□□□ -0.62
RSA3Q05942 YLR236CYLR236C 324 nt11.11□□□□□ -0.63
RSA3Q05942 TIR4YOR009W 1464 nt11.11□□□□□ -0.63
RSA3Q05942 YMR057CYMR057C 372 nt11.09□□□□□ -0.63
RSA3Q05942 LCB1YMR296C 1677 nt11.08□□□□□ -0.64
RSA3Q05942 NAR1YNL240C 1476 nt11.06□□□□□ -0.64
RSA3Q05942 NPL3YDR432W 1245 nt11.06□□□□□ -0.64
RSA3Q05942 DSK2YMR276W 1122 nt11.01□□□□□ -0.65
RSA3Q05942 YLR154C-GYLR154C-G 150 nt10.97□□□□□ -0.65
RSA3Q05942 YOR139CYOR139C 393 nt10.96□□□□□ -0.65
RSA3Q05942 YJL152WYJL152W 360 nt10.95□□□□□ -0.66
RSA3Q05942 FUR4YBR021W 1902 nt10.94□□□□□ -0.66
RSA3Q05942 AAC1YMR056C 930 nt10.92□□□□□ -0.66
RSA3Q05942 PRP4YPR178W 1398 nt10.88□□□□□ -0.67
RSA3Q05942 RDN37-1RDN37-1 5354 nt10.87□□□□□ -0.67
RSA3Q05942 RDN37-2RDN37-2 5354 nt10.87□□□□□ -0.67
RSA3Q05942 LYS4YDR234W 2082 nt10.86□□□□□ -0.67
RSA3Q05942 YCL048W-AYCL048W-A 240 nt10.85□□□□□ -0.67
RSA3Q05942 BIO4YNR057C 714 nt10.84□□□□□ -0.67
RSA3Q05942 YEL076C-AYEL076C-A 651 nt10.83□□□□□ -0.68
RSA3Q05942 YEL076CYEL076C 651 nt10.83□□□□□ -0.68
RSA3Q05942 YLR464WYLR464W 651 nt10.83□□□□□ -0.68
RSA3Q05942 WHI5YOR083W 888 nt10.83□□□□□ -0.68
RSA3Q05942 YLR281CYLR281C 468 nt10.82□□□□□ -0.68
RSA3Q05942 DPS1YLL018C 1674 nt10.82□□□□□ -0.68
RSA3Q05942 BIO5YNR056C 1686 nt10.79□□□□□ -0.68
RSA3Q05942 CMP2YML057W 1815 nt10.78□□□□□ -0.68
RSA3Q05942 PBP1YGR178C 2169 nt10.77□□□□□ -0.69
RSA3Q05942 CYT2YKL087C 675 nt10.76□□□□□ -0.69
RSA3Q05942 IMP2'YIL154C 1041 nt10.74□□□□□ -0.69
RSA3Q05942 IDH1YNL037C 1083 nt10.73□□□□□ -0.69
RSA3Q05942 SIM1YIL123W 1431 nt10.73□□□□□ -0.69
RSA3Q05942 BMT6YLR063W 1098 nt10.71□□□□□ -0.69
RSA3Q05942 SNF1YDR477W 1902 nt10.68□□□□□ -0.7
RSA3Q05942 HSL7YBR133C 2484 nt10.67□□□□□ -0.7
RSA3Q05942 PUS2YGL063W 1113 nt10.66□□□□□ -0.7
RSA3Q05942 GBP2YCL011C 1284 nt10.62□□□□□ -0.71
RSA3Q05942 CCA1YER168C 1641 nt10.61□□□□□ -0.71
RSA3Q05942 YKR005CYKR005C 1578 nt10.6□□□□□ -0.71
RSA3Q05942 tM(CAU)CtM(CAU)C 72 nt10.58□□□□□ -0.72
RSA3Q05942 IMT4tM(CAU)E 72 nt10.58□□□□□ -0.72
RSA3Q05942 IMT3tM(CAU)J3 72 nt10.58□□□□□ -0.72
RSA3Q05942 IMT1tM(CAU)O1 72 nt10.58□□□□□ -0.72
RSA3Q05942 IMT2tM(CAU)P 72 nt10.58□□□□□ -0.72
RSA3Q05942 TCD2YKL027W 1344 nt10.57□□□□□ -0.72
RSA3Q05942 YHR056W-AYHR056W-A 435 nt10.56□□□□□ -0.72
RSA3Q05942 RRD1YIL153W 1182 nt10.53□□□□□ -0.72
RSA3Q05942 PCM1YEL058W 1674 nt10.53□□□□□ -0.72
RSA3Q05942 FMP52YER004W 696 nt10.52□□□□□ -0.73
RSA3Q05942 YDR433WYDR433W 441 nt10.49□□□□□ -0.73
RSA3Q05942 DED1YOR204W 1815 nt10.48□□□□□ -0.73
RSA3Q05942 YAT1YAR035W 2064 nt10.48□□□□□ -0.73
RSA3Q05942 IRC24YIR036C 792 nt10.47□□□□□ -0.73
RSA3Q05942 NDI1YML120C 1542 nt10.46□□□□□ -0.74
RSA3Q05942 RAX1YOR301W 1308 nt10.45□□□□□ -0.74
RSA3Q05942 CRR1YLR213C 1269 nt10.45□□□□□ -0.74
RSA3Q05942 ERF2YLR246W 1080 nt10.45□□□□□ -0.74
RSA3Q05942 HEL2YDR266C 1920 nt10.45□□□□□ -0.74
RSA3Q05942 YGR259CYGR259C 441 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms