Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 WHI5YOR083W 888 nt12.08□□□□□ -0.48
SSL1Q04673 YLR154C-GYLR154C-G 150 nt12.07□□□□□ -0.48
SSL1Q04673 CAC2YML102W 1407 nt12.04□□□□□ -0.48
SSL1Q04673 tM(CAU)CtM(CAU)C 72 nt12.04□□□□□ -0.48
SSL1Q04673 IMT4tM(CAU)E 72 nt12.04□□□□□ -0.48
SSL1Q04673 IMT3tM(CAU)J3 72 nt12.04□□□□□ -0.48
SSL1Q04673 IMT1tM(CAU)O1 72 nt12.04□□□□□ -0.48
SSL1Q04673 IMT2tM(CAU)P 72 nt12.04□□□□□ -0.48
SSL1Q04673 EMI2YDR516C 1503 nt12.01□□□□□ -0.49
SSL1Q04673 ART5YGR068C 1761 nt12□□□□□ -0.49
SSL1Q04673 TIR4YOR009W 1464 nt12□□□□□ -0.49
SSL1Q04673 PUS2YGL063W 1113 nt11.97□□□□□ -0.49
SSL1Q04673 GFD2YCL036W 1701 nt11.97□□□□□ -0.49
SSL1Q04673 PET9YBL030C 957 nt11.96□□□□□ -0.49
SSL1Q04673 YCH1YGR203W 447 nt11.94□□□□□ -0.5
SSL1Q04673 YJL152WYJL152W 360 nt11.94□□□□□ -0.5
SSL1Q04673 YDL221WYDL221W 552 nt11.93□□□□□ -0.5
SSL1Q04673 YMR090WYMR090W 684 nt11.91□□□□□ -0.5
SSL1Q04673 IRC15YPL017C 1500 nt11.87□□□□□ -0.51
SSL1Q04673 YMR057CYMR057C 372 nt11.85□□□□□ -0.51
SSL1Q04673 IMP2'YIL154C 1041 nt11.82□□□□□ -0.52
SSL1Q04673 DSK2YMR276W 1122 nt11.82□□□□□ -0.52
SSL1Q04673 RTS2YOR077W 699 nt11.8□□□□□ -0.52
SSL1Q04673 YBR220CYBR220C 1683 nt11.8□□□□□ -0.52
SSL1Q04673 YLR236CYLR236C 324 nt11.79□□□□□ -0.52
SSL1Q04673 YPR011CYPR011C 981 nt11.79□□□□□ -0.52
SSL1Q04673 SDH1YKL148C 1923 nt11.78□□□□□ -0.52
SSL1Q04673 GIS3YLR094C 1509 nt11.78□□□□□ -0.52
SSL1Q04673 IDH1YNL037C 1083 nt11.75□□□□□ -0.53
SSL1Q04673 YCL048W-AYCL048W-A 240 nt11.73□□□□□ -0.53
SSL1Q04673 FPS1YLL043W 2010 nt11.72□□□□□ -0.53
SSL1Q04673 CUE1YMR264W 612 nt11.72□□□□□ -0.53
SSL1Q04673 SCC4YER147C 1875 nt11.72□□□□□ -0.53
SSL1Q04673 FMP45YDL222C 930 nt11.66□□□□□ -0.54
SSL1Q04673 GBP2YCL011C 1284 nt11.65□□□□□ -0.54
SSL1Q04673 BDF1YLR399C 2061 nt11.64□□□□□ -0.55
SSL1Q04673 ERV46YAL042W 1248 nt11.6□□□□□ -0.55
SSL1Q04673 LPX1YOR084W 1164 nt11.59□□□□□ -0.55
SSL1Q04673 YDR433WYDR433W 441 nt11.58□□□□□ -0.56
SSL1Q04673 YIL100WYIL100W 354 nt11.55□□□□□ -0.56
SSL1Q04673 RRD1YIL153W 1182 nt11.54□□□□□ -0.56
SSL1Q04673 TCD2YKL027W 1344 nt11.53□□□□□ -0.56
SSL1Q04673 MXR2YCL033C 507 nt11.52□□□□□ -0.57
SSL1Q04673 DED1YOR204W 1815 nt11.51□□□□□ -0.57
SSL1Q04673 TAT1YBR069C 1860 nt11.51□□□□□ -0.57
SSL1Q04673 YKR040CYKR040C 504 nt11.5□□□□□ -0.57
SSL1Q04673 MRPL8YJL063C 717 nt11.43□□□□□ -0.58
SSL1Q04673 YSC84YHR016C 1407 nt11.42□□□□□ -0.58
SSL1Q04673 FMT1YBL013W 1206 nt11.4□□□□□ -0.58
SSL1Q04673 RRT12YCR045C 1476 nt11.39□□□□□ -0.59
SSL1Q04673 YNL195CYNL195C 786 nt11.39□□□□□ -0.59
SSL1Q04673 YHL050CYHL050C 2094 nt11.39□□□□□ -0.59
SSL1Q04673 FMP52YER004W 696 nt11.38□□□□□ -0.59
SSL1Q04673 SEC11YIR022W 504 nt11.36□□□□□ -0.59
SSL1Q04673 UBX6YJL048C 1191 nt11.34□□□□□ -0.59
SSL1Q04673 SPP1YPL138C 1062 nt11.34□□□□□ -0.59
SSL1Q04673 FRD1YEL047C 1413 nt11.34□□□□□ -0.59
SSL1Q04673 SOR2YDL246C 1074 nt11.33□□□□□ -0.6
SSL1Q04673 SOR1YJR159W 1074 nt11.33□□□□□ -0.6
SSL1Q04673 NVJ2YPR091C 2313 nt11.31□□□□□ -0.6
SSL1Q04673 PCH2YBR186W 1695 nt11.3□□□□□ -0.6
SSL1Q04673 YCL042WYCL042W 360 nt11.29□□□□□ -0.6
SSL1Q04673 CWP1YKL096W 720 nt11.27□□□□□ -0.61
SSL1Q04673 ADH2YMR303C 1047 nt11.25□□□□□ -0.61
SSL1Q04673 PCM1YEL058W 1674 nt11.24□□□□□ -0.61
SSL1Q04673 ADO1YJR105W 1023 nt11.24□□□□□ -0.61
SSL1Q04673 GUT2YIL155C 1950 nt11.23□□□□□ -0.61
SSL1Q04673 SNF6YHL025W 999 nt11.17□□□□□ -0.62
SSL1Q04673 RTG1YOL067C 534 nt11.13□□□□□ -0.63
SSL1Q04673 PTH1YHR189W 573 nt11.11□□□□□ -0.63
SSL1Q04673 PAC11YDR488C 1602 nt11.1□□□□□ -0.63
SSL1Q04673 LCB1YMR296C 1677 nt11.1□□□□□ -0.63
SSL1Q04673 PIB2YGL023C 1908 nt11.09□□□□□ -0.63
SSL1Q04673 YIH1YCR059C 777 nt11.09□□□□□ -0.63
SSL1Q04673 YEL076C-AYEL076C-A 651 nt11.08□□□□□ -0.64
SSL1Q04673 YEL076CYEL076C 651 nt11.08□□□□□ -0.64
SSL1Q04673 YLR235CYLR235C 399 nt11.08□□□□□ -0.64
SSL1Q04673 YLR464WYLR464W 651 nt11.08□□□□□ -0.64
SSL1Q04673 NCP1YHR042W 2076 nt11.07□□□□□ -0.64
SSL1Q04673 SIM1YIL123W 1431 nt11.07□□□□□ -0.64
SSL1Q04673 RTF1YGL244W 1677 nt11.06□□□□□ -0.64
SSL1Q04673 BIO4YNR057C 714 nt11.06□□□□□ -0.64
SSL1Q04673 RNQ1YCL028W 1218 nt11.06□□□□□ -0.64
SSL1Q04673 DIC1YLR348C 897 nt11.05□□□□□ -0.64
SSL1Q04673 BOP3YNL042W 1191 nt11.04□□□□□ -0.64
SSL1Q04673 YKL030WYKL030W 606 nt11.01□□□□□ -0.65
SSL1Q04673 YLL053CYLL053C 459 nt10.97□□□□□ -0.65
SSL1Q04673 TIM23YNR017W 669 nt10.95□□□□□ -0.66
SSL1Q04673 YFL015W-AYFL015W-A 318 nt10.92□□□□□ -0.66
SSL1Q04673 PTK1YKL198C 1989 nt10.91□□□□□ -0.66
SSL1Q04673 FTR1YER145C 1215 nt10.9□□□□□ -0.66
SSL1Q04673 HUA1YGR268C 597 nt10.9□□□□□ -0.66
SSL1Q04673 YLR179CYLR179C 606 nt10.9□□□□□ -0.66
SSL1Q04673 ERF2YLR246W 1080 nt10.89□□□□□ -0.67
SSL1Q04673 LYS4YDR234W 2082 nt10.88□□□□□ -0.67
SSL1Q04673 GAL1YBR020W 1587 nt10.87□□□□□ -0.67
SSL1Q04673 YDR094WYDR094W 336 nt10.86□□□□□ -0.67
SSL1Q04673 CRR1YLR213C 1269 nt10.86□□□□□ -0.67
SSL1Q04673 AQY1YPR192W 918 nt10.85□□□□□ -0.67
SSL1Q04673 ATF2YGR177C 1608 nt10.84□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms