Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Tpm1P58771 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Tpm1P58771 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Tpm1P58771 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.18■■■□□ 2.42
Tpm1P58771 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Tpm1P58771 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Tpm1P58771 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Tpm1P58771 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.08■■■□□ 2.41
Tpm1P58771 Gm27325-201ENSMUST00000175467 74 ntBASIC30.08■■■□□ 2.41
Tpm1P58771 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Tpm1P58771 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Tpm1P58771 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
Tpm1P58771 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Tpm1P58771 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Tpm1P58771 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.97■■■□□ 2.39
Tpm1P58771 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Tpm1P58771 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Tpm1P58771 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Tpm1P58771 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Tpm1P58771 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.78■■■□□ 2.36
Tpm1P58771 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tpm1P58771 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tpm1P58771 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Tpm1P58771 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Tpm1P58771 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Tpm1P58771 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.68■■■□□ 2.34
Tpm1P58771 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Tpm1P58771 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Tpm1P58771 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Tpm1P58771 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tpm1P58771 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tpm1P58771 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Tpm1P58771 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.61■■■□□ 2.33
Tpm1P58771 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.58■■■□□ 2.33
Tpm1P58771 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Tpm1P58771 Gm25238-201ENSMUST00000174914 89 ntBASIC29.51■■■□□ 2.31
Tpm1P58771 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.49■■■□□ 2.31
Tpm1P58771 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.46■■■□□ 2.31
Tpm1P58771 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Tpm1P58771 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
Tpm1P58771 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
Tpm1P58771 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Tpm1P58771 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.41■■■□□ 2.3
Tpm1P58771 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Tpm1P58771 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tpm1P58771 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
Tpm1P58771 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Tpm1P58771 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.3■■■□□ 2.28
Tpm1P58771 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.29■■■□□ 2.28
Tpm1P58771 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tpm1P58771 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.21■■■□□ 2.27
Tpm1P58771 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Tpm1P58771 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tpm1P58771 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Tpm1P58771 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Tpm1P58771 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Tpm1P58771 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Tpm1P58771 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.12■■■□□ 2.25
Tpm1P58771 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Tpm1P58771 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
Tpm1P58771 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tpm1P58771 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Tpm1P58771 Zxda-201ENSMUST00000117281 2621 ntBASIC29.05■■■□□ 2.24
Tpm1P58771 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Tpm1P58771 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Tpm1P58771 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.03■■■□□ 2.24
Tpm1P58771 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tpm1P58771 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Tpm1P58771 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.01■■■□□ 2.23
Tpm1P58771 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Tpm1P58771 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
Tpm1P58771 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Tpm1P58771 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tpm1P58771 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tpm1P58771 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tpm1P58771 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tpm1P58771 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.89■■■□□ 2.22
Tpm1P58771 Rab21-202ENSMUST00000218831 843 ntBASIC28.89■■■□□ 2.22
Tpm1P58771 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tpm1P58771 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Tpm1P58771 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Tpm1P58771 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Tpm1P58771 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tpm1P58771 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Tpm1P58771 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.86■■■□□ 2.21
Tpm1P58771 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tpm1P58771 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Tpm1P58771 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.84■■■□□ 2.21
Tpm1P58771 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tpm1P58771 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tpm1P58771 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tpm1P58771 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tpm1P58771 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.8■■■□□ 2.2
Tpm1P58771 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tpm1P58771 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tpm1P58771 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tpm1P58771 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.74■■■□□ 2.19
Tpm1P58771 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Tpm1P58771 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
Tpm1P58771 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.69■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms