Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rom1P32958 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rom1P32958 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rom1P32958 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rom1P32958 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rom1P32958 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rom1P32958 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rom1P32958 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rom1P32958 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rom1P32958 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.46■■□□□ 1.03
Rom1P32958 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.45■■□□□ 1.02
Rom1P32958 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rom1P32958 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rom1P32958 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rom1P32958 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rom1P32958 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rom1P32958 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rom1P32958 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.38■■□□□ 1.01
Rom1P32958 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
Rom1P32958 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rom1P32958 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rom1P32958 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rom1P32958 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rom1P32958 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rom1P32958 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.32■■□□□ 1
Rom1P32958 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.22■□□□□ 0.99
Rom1P32958 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.2■□□□□ 0.98
Rom1P32958 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rom1P32958 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rom1P32958 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rom1P32958 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rom1P32958 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rom1P32958 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Rom1P32958 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rom1P32958 Gm27325-201ENSMUST00000175467 74 ntBASIC21.1■□□□□ 0.97
Rom1P32958 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.06■□□□□ 0.96
Rom1P32958 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rom1P32958 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rom1P32958 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rom1P32958 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rom1P32958 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rom1P32958 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rom1P32958 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rom1P32958 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rom1P32958 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rom1P32958 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rom1P32958 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rom1P32958 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.92■□□□□ 0.94
Rom1P32958 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rom1P32958 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rom1P32958 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rom1P32958 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rom1P32958 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rom1P32958 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rom1P32958 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rom1P32958 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.87■□□□□ 0.93
Rom1P32958 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rom1P32958 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.87■□□□□ 0.93
Rom1P32958 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rom1P32958 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rom1P32958 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rom1P32958 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rom1P32958 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rom1P32958 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rom1P32958 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.78■□□□□ 0.92
Rom1P32958 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rom1P32958 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rom1P32958 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rom1P32958 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rom1P32958 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rom1P32958 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.72■□□□□ 0.91
Rom1P32958 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rom1P32958 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rom1P32958 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rom1P32958 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.71■□□□□ 0.91
Rom1P32958 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rom1P32958 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rom1P32958 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rom1P32958 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rom1P32958 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rom1P32958 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
Rom1P32958 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.65■□□□□ 0.9
Rom1P32958 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rom1P32958 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rom1P32958 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rom1P32958 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rom1P32958 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rom1P32958 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rom1P32958 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.58■□□□□ 0.89
Rom1P32958 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rom1P32958 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rom1P32958 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rom1P32958 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.53■□□□□ 0.88
Rom1P32958 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rom1P32958 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rom1P32958 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rom1P32958 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.49■□□□□ 0.87
Rom1P32958 Zxda-201ENSMUST00000117281 2621 ntBASIC20.49■□□□□ 0.87
Rom1P32958 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rom1P32958 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms