Protein–RNA interactions for Protein: P19253

Rpl13a, 60S ribosomal protein L13a, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13aP19253 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpl13aP19253 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rpl13aP19253 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rpl13aP19253 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.63■□□□□ 0.73
Rpl13aP19253 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rpl13aP19253 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13aP19253 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13aP19253 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Rpl13aP19253 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpl13aP19253 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Rpl13aP19253 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpl13aP19253 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rpl13aP19253 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rpl13aP19253 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl13aP19253 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rpl13aP19253 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl13aP19253 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl13aP19253 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.53■□□□□ 0.72
Rpl13aP19253 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpl13aP19253 Gm25238-201ENSMUST00000174914 89 ntBASIC19.51■□□□□ 0.71
Rpl13aP19253 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl13aP19253 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.48■□□□□ 0.71
Rpl13aP19253 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl13aP19253 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Rpl13aP19253 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rpl13aP19253 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl13aP19253 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl13aP19253 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl13aP19253 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl13aP19253 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl13aP19253 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpl13aP19253 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rpl13aP19253 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl13aP19253 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.37■□□□□ 0.69
Rpl13aP19253 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rpl13aP19253 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl13aP19253 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl13aP19253 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl13aP19253 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl13aP19253 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl13aP19253 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rpl13aP19253 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rpl13aP19253 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.31■□□□□ 0.68
Rpl13aP19253 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl13aP19253 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl13aP19253 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl13aP19253 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpl13aP19253 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl13aP19253 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpl13aP19253 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13aP19253 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl13aP19253 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13aP19253 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl13aP19253 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl13aP19253 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13aP19253 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13aP19253 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl13aP19253 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpl13aP19253 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.18■□□□□ 0.66
Rpl13aP19253 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpl13aP19253 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl13aP19253 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl13aP19253 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl13aP19253 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl13aP19253 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rpl13aP19253 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.11■□□□□ 0.65
Rpl13aP19253 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rpl13aP19253 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpl13aP19253 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpl13aP19253 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpl13aP19253 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rpl13aP19253 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rpl13aP19253 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpl13aP19253 Gm27325-201ENSMUST00000175467 74 ntBASIC19.05■□□□□ 0.64
Rpl13aP19253 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
Rpl13aP19253 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.04■□□□□ 0.64
Rpl13aP19253 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpl13aP19253 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpl13aP19253 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rpl13aP19253 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Rpl13aP19253 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpl13aP19253 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.98■□□□□ 0.63
Rpl13aP19253 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpl13aP19253 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl13aP19253 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpl13aP19253 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl13aP19253 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl13aP19253 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rpl13aP19253 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rpl13aP19253 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl13aP19253 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl13aP19253 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl13aP19253 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpl13aP19253 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl13aP19253 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpl13aP19253 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Rpl13aP19253 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl13aP19253 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl13aP19253 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl13aP19253 Gm25262-201ENSMUST00000174934 133 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms