Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32■■■□□ 2.71
Kcna1P16388 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Kcna1P16388 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Kcna1P16388 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.93■■■□□ 2.7
Kcna1P16388 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Kcna1P16388 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Kcna1P16388 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Kcna1P16388 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.89■■■□□ 2.7
Kcna1P16388 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Kcna1P16388 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Kcna1P16388 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
Kcna1P16388 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.82■■■□□ 2.68
Kcna1P16388 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Kcna1P16388 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.81■■■□□ 2.68
Kcna1P16388 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
Kcna1P16388 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Kcna1P16388 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.71■■■□□ 2.67
Kcna1P16388 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Kcna1P16388 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Kcna1P16388 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.59■■■□□ 2.65
Kcna1P16388 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kcna1P16388 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Kcna1P16388 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Kcna1P16388 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Kcna1P16388 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Kcna1P16388 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.48■■■□□ 2.63
Kcna1P16388 Gm26115-201ENSMUST00000175605 87 ntBASIC31.47■■■□□ 2.63
Kcna1P16388 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Kcna1P16388 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Kcna1P16388 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Kcna1P16388 Gm8109-201ENSMUST00000194076 746 ntBASIC31.42■■■□□ 2.62
Kcna1P16388 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.41■■■□□ 2.62
Kcna1P16388 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Kcna1P16388 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Kcna1P16388 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.33■■■□□ 2.61
Kcna1P16388 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Kcna1P16388 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kcna1P16388 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Kcna1P16388 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.24■■■□□ 2.59
Kcna1P16388 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Kcna1P16388 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Kcna1P16388 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.17■■■□□ 2.58
Kcna1P16388 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Kcna1P16388 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Kcna1P16388 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Kcna1P16388 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Kcna1P16388 Gm27322-201ENSMUST00000184007 104 ntBASIC31.09■■■□□ 2.57
Kcna1P16388 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.09■■■□□ 2.57
Kcna1P16388 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Kcna1P16388 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
Kcna1P16388 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Kcna1P16388 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.01■■■□□ 2.55
Kcna1P16388 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Kcna1P16388 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31■■■□□ 2.55
Kcna1P16388 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Kcna1P16388 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Kcna1P16388 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.93■■■□□ 2.54
Kcna1P16388 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Kcna1P16388 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Kcna1P16388 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Kcna1P16388 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Kcna1P16388 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kcna1P16388 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kcna1P16388 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Kcna1P16388 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.81■■■□□ 2.52
Kcna1P16388 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Kcna1P16388 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Kcna1P16388 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Kcna1P16388 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.69■■■□□ 2.5
Kcna1P16388 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Kcna1P16388 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Kcna1P16388 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Kcna1P16388 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Kcna1P16388 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Kcna1P16388 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Kcna1P16388 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Kcna1P16388 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Kcna1P16388 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Kcna1P16388 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.55■■■□□ 2.48
Kcna1P16388 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Kcna1P16388 Mipep-204ENSMUST00000225043 1548 ntBASIC30.52■■■□□ 2.48
Kcna1P16388 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Kcna1P16388 Gm24804-201ENSMUST00000174982 85 ntBASIC30.48■■■□□ 2.47
Kcna1P16388 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Kcna1P16388 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Kcna1P16388 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Kcna1P16388 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Kcna1P16388 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Kcna1P16388 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Kcna1P16388 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Kcna1P16388 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Kcna1P16388 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Kcna1P16388 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.34■■■□□ 2.45
Kcna1P16388 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Kcna1P16388 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Kcna1P16388 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Kcna1P16388 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Kcna1P16388 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.24■■■□□ 2.43
Kcna1P16388 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Kcna1P16388 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms