Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Hoxc6P10629 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Hoxc6P10629 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.79■■■□□ 2.68
Hoxc6P10629 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Hoxc6P10629 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Hoxc6P10629 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Hoxc6P10629 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Hoxc6P10629 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Hoxc6P10629 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Hoxc6P10629 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Hoxc6P10629 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hoxc6P10629 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hoxc6P10629 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.61■■■□□ 2.65
Hoxc6P10629 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Hoxc6P10629 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.56■■■□□ 2.64
Hoxc6P10629 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hoxc6P10629 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.5■■■□□ 2.63
Hoxc6P10629 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hoxc6P10629 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.47■■■□□ 2.63
Hoxc6P10629 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hoxc6P10629 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.35■■■□□ 2.61
Hoxc6P10629 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Hoxc6P10629 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Hoxc6P10629 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.27■■■□□ 2.6
Hoxc6P10629 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hoxc6P10629 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Hoxc6P10629 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Hoxc6P10629 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
Hoxc6P10629 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hoxc6P10629 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Hoxc6P10629 Zfp131-205ENSMUST00000223812 663 ntBASIC31.14■■■□□ 2.58
Hoxc6P10629 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Hoxc6P10629 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Hoxc6P10629 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.1■■■□□ 2.57
Hoxc6P10629 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hoxc6P10629 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Hoxc6P10629 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.08■■■□□ 2.57
Hoxc6P10629 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hoxc6P10629 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Hoxc6P10629 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Hoxc6P10629 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Hoxc6P10629 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Hoxc6P10629 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hoxc6P10629 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.98■■■□□ 2.55
Hoxc6P10629 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Hoxc6P10629 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Hoxc6P10629 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Hoxc6P10629 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
Hoxc6P10629 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.9■■■□□ 2.54
Hoxc6P10629 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
Hoxc6P10629 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Hoxc6P10629 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.8■■■□□ 2.52
Hoxc6P10629 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Hoxc6P10629 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Hoxc6P10629 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Hoxc6P10629 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Hoxc6P10629 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Hoxc6P10629 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.7■■■□□ 2.51
Hoxc6P10629 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hoxc6P10629 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Hoxc6P10629 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.62■■■□□ 2.49
Hoxc6P10629 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hoxc6P10629 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Hoxc6P10629 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Hoxc6P10629 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Hoxc6P10629 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hoxc6P10629 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hoxc6P10629 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Hoxc6P10629 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hoxc6P10629 Gm16148-201ENSMUST00000119653 893 ntBASIC30.5■■■□□ 2.47
Hoxc6P10629 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Hoxc6P10629 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hoxc6P10629 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hoxc6P10629 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
Hoxc6P10629 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hoxc6P10629 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Hoxc6P10629 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Hoxc6P10629 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
Hoxc6P10629 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hoxc6P10629 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.38■■■□□ 2.45
Hoxc6P10629 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Hoxc6P10629 Peli2-204ENSMUST00000226513 1320 ntBASIC30.33■■■□□ 2.45
Hoxc6P10629 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Hoxc6P10629 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.32■■■□□ 2.44
Hoxc6P10629 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Hoxc6P10629 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
Hoxc6P10629 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Hoxc6P10629 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Hoxc6P10629 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Hoxc6P10629 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.26■■■□□ 2.43
Hoxc6P10629 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Hoxc6P10629 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Hoxc6P10629 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hoxc6P10629 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hoxc6P10629 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.23■■■□□ 2.43
Hoxc6P10629 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Hoxc6P10629 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Hoxc6P10629 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.17■■■□□ 2.42
Hoxc6P10629 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.15■■■□□ 2.42
Hoxc6P10629 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms