Protein–RNA interactions for Protein: P0CX36

RPS4B, 40S ribosomal protein S4-B, yeastyeast

Known RBP Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS4BP0CX36 YMR090WYMR090W 684 nt12□□□□□ -0.49
RPS4BP0CX36 SIS1YNL007C 1059 nt11.98□□□□□ -0.49
RPS4BP0CX36 YDL221WYDL221W 552 nt11.97□□□□□ -0.49
RPS4BP0CX36 BDF1YLR399C 2061 nt11.95□□□□□ -0.5
RPS4BP0CX36 YLR281CYLR281C 468 nt11.94□□□□□ -0.5
RPS4BP0CX36 tM(CAU)CtM(CAU)C 72 nt11.93□□□□□ -0.5
RPS4BP0CX36 IMT4tM(CAU)E 72 nt11.93□□□□□ -0.5
RPS4BP0CX36 IMT3tM(CAU)J3 72 nt11.93□□□□□ -0.5
RPS4BP0CX36 IMT1tM(CAU)O1 72 nt11.93□□□□□ -0.5
RPS4BP0CX36 IMT2tM(CAU)P 72 nt11.93□□□□□ -0.5
RPS4BP0CX36 YBR220CYBR220C 1683 nt11.92□□□□□ -0.5
RPS4BP0CX36 WHI5YOR083W 888 nt11.88□□□□□ -0.51
RPS4BP0CX36 SDH1YKL148C 1923 nt11.86□□□□□ -0.51
RPS4BP0CX36 ART5YGR068C 1761 nt11.85□□□□□ -0.51
RPS4BP0CX36 GFD2YCL036W 1701 nt11.83□□□□□ -0.52
RPS4BP0CX36 IRC15YPL017C 1500 nt11.83□□□□□ -0.52
RPS4BP0CX36 PUS2YGL063W 1113 nt11.82□□□□□ -0.52
RPS4BP0CX36 YLR154C-GYLR154C-G 150 nt11.81□□□□□ -0.52
RPS4BP0CX36 TAT1YBR069C 1860 nt11.8□□□□□ -0.52
RPS4BP0CX36 RTS2YOR077W 699 nt11.78□□□□□ -0.52
RPS4BP0CX36 SCC4YER147C 1875 nt11.76□□□□□ -0.53
RPS4BP0CX36 TIR4YOR009W 1464 nt11.76□□□□□ -0.53
RPS4BP0CX36 GIS3YLR094C 1509 nt11.75□□□□□ -0.53
RPS4BP0CX36 PET9YBL030C 957 nt11.74□□□□□ -0.53
RPS4BP0CX36 YCH1YGR203W 447 nt11.67□□□□□ -0.54
RPS4BP0CX36 YJL152WYJL152W 360 nt11.67□□□□□ -0.54
RPS4BP0CX36 YPR011CYPR011C 981 nt11.66□□□□□ -0.54
RPS4BP0CX36 YMR057CYMR057C 372 nt11.65□□□□□ -0.54
RPS4BP0CX36 YLR236CYLR236C 324 nt11.63□□□□□ -0.55
RPS4BP0CX36 DSK2YMR276W 1122 nt11.63□□□□□ -0.55
RPS4BP0CX36 CUE1YMR264W 612 nt11.61□□□□□ -0.55
RPS4BP0CX36 IMP2'YIL154C 1041 nt11.58□□□□□ -0.56
RPS4BP0CX36 YSC84YHR016C 1407 nt11.52□□□□□ -0.56
RPS4BP0CX36 FMP45YDL222C 930 nt11.52□□□□□ -0.57
RPS4BP0CX36 SEC11YIR022W 504 nt11.52□□□□□ -0.57
RPS4BP0CX36 FPS1YLL043W 2010 nt11.51□□□□□ -0.57
RPS4BP0CX36 PCH2YBR186W 1695 nt11.5□□□□□ -0.57
RPS4BP0CX36 YIL100WYIL100W 354 nt11.49□□□□□ -0.57
RPS4BP0CX36 IDH1YNL037C 1083 nt11.48□□□□□ -0.57
RPS4BP0CX36 YCL048W-AYCL048W-A 240 nt11.47□□□□□ -0.57
RPS4BP0CX36 RRT12YCR045C 1476 nt11.44□□□□□ -0.58
RPS4BP0CX36 GUT2YIL155C 1950 nt11.43□□□□□ -0.58
RPS4BP0CX36 YHL050CYHL050C 2094 nt11.43□□□□□ -0.58
RPS4BP0CX36 YNL195CYNL195C 786 nt11.42□□□□□ -0.58
RPS4BP0CX36 LPX1YOR084W 1164 nt11.42□□□□□ -0.58
RPS4BP0CX36 ERV46YAL042W 1248 nt11.4□□□□□ -0.58
RPS4BP0CX36 GBP2YCL011C 1284 nt11.4□□□□□ -0.58
RPS4BP0CX36 YDR433WYDR433W 441 nt11.37□□□□□ -0.59
RPS4BP0CX36 YGR139WYGR139W 339 nt11.34□□□□□ -0.59
RPS4BP0CX36 MXR2YCL033C 507 nt11.32□□□□□ -0.6
RPS4BP0CX36 YKR040CYKR040C 504 nt11.28□□□□□ -0.6
RPS4BP0CX36 RRD1YIL153W 1182 nt11.27□□□□□ -0.61
RPS4BP0CX36 DED1YOR204W 1815 nt11.27□□□□□ -0.61
RPS4BP0CX36 TCD2YKL027W 1344 nt11.26□□□□□ -0.61
RPS4BP0CX36 SPP1YPL138C 1062 nt11.25□□□□□ -0.61
RPS4BP0CX36 RTF1YGL244W 1677 nt11.23□□□□□ -0.61
RPS4BP0CX36 PIB2YGL023C 1908 nt11.23□□□□□ -0.61
RPS4BP0CX36 NME1NME1 340 nt11.19□□□□□ -0.62
RPS4BP0CX36 BOP3YNL042W 1191 nt11.18□□□□□ -0.62
RPS4BP0CX36 FMT1YBL013W 1206 nt11.15□□□□□ -0.62
RPS4BP0CX36 FRD1YEL047C 1413 nt11.12□□□□□ -0.63
RPS4BP0CX36 FMP52YER004W 696 nt11.08□□□□□ -0.64
RPS4BP0CX36 PAC11YDR488C 1602 nt11.07□□□□□ -0.64
RPS4BP0CX36 SOR2YDL246C 1074 nt11.07□□□□□ -0.64
RPS4BP0CX36 SOR1YJR159W 1074 nt11.07□□□□□ -0.64
RPS4BP0CX36 NCP1YHR042W 2076 nt11.05□□□□□ -0.64
RPS4BP0CX36 MRPL8YJL063C 717 nt11.05□□□□□ -0.64
RPS4BP0CX36 LCB1YMR296C 1677 nt11.04□□□□□ -0.64
RPS4BP0CX36 RTG1YOL067C 534 nt11.04□□□□□ -0.64
RPS4BP0CX36 PTK1YKL198C 1989 nt11.03□□□□□ -0.64
RPS4BP0CX36 PCM1YEL058W 1674 nt11.03□□□□□ -0.64
RPS4BP0CX36 YCL042WYCL042W 360 nt11.02□□□□□ -0.65
RPS4BP0CX36 CWP1YKL096W 720 nt11.01□□□□□ -0.65
RPS4BP0CX36 ADH2YMR303C 1047 nt11□□□□□ -0.65
RPS4BP0CX36 SIM1YIL123W 1431 nt10.97□□□□□ -0.65
RPS4BP0CX36 YEL076C-AYEL076C-A 651 nt10.96□□□□□ -0.65
RPS4BP0CX36 YEL076CYEL076C 651 nt10.96□□□□□ -0.65
RPS4BP0CX36 YLR464WYLR464W 651 nt10.96□□□□□ -0.65
RPS4BP0CX36 SNF6YHL025W 999 nt10.95□□□□□ -0.66
RPS4BP0CX36 PTH1YHR189W 573 nt10.93□□□□□ -0.66
RPS4BP0CX36 ADO1YJR105W 1023 nt10.91□□□□□ -0.66
RPS4BP0CX36 BIO4YNR057C 714 nt10.89□□□□□ -0.67
RPS4BP0CX36 YFL054CYFL054C 1941 nt10.88□□□□□ -0.67
RPS4BP0CX36 YLR235CYLR235C 399 nt10.85□□□□□ -0.67
RPS4BP0CX36 YKL030WYKL030W 606 nt10.82□□□□□ -0.68
RPS4BP0CX36 DIC1YLR348C 897 nt10.8□□□□□ -0.68
RPS4BP0CX36 YIH1YCR059C 777 nt10.79□□□□□ -0.68
RPS4BP0CX36 HUA1YGR268C 597 nt10.78□□□□□ -0.68
RPS4BP0CX36 LYS4YDR234W 2082 nt10.78□□□□□ -0.68
RPS4BP0CX36 RNQ1YCL028W 1218 nt10.77□□□□□ -0.69
RPS4BP0CX36 SPT8YLR055C 1809 nt10.76□□□□□ -0.69
RPS4BP0CX36 YLL053CYLL053C 459 nt10.75□□□□□ -0.69
RPS4BP0CX36 ERF2YLR246W 1080 nt10.73□□□□□ -0.69
RPS4BP0CX36 TIM23YNR017W 669 nt10.73□□□□□ -0.69
RPS4BP0CX36 CRR1YLR213C 1269 nt10.7□□□□□ -0.7
RPS4BP0CX36 YLR179CYLR179C 606 nt10.67□□□□□ -0.7
RPS4BP0CX36 FTR1YER145C 1215 nt10.64□□□□□ -0.71
RPS4BP0CX36 ATF2YGR177C 1608 nt10.64□□□□□ -0.71
RPS4BP0CX36 UBX6YJL048C 1191 nt10.63□□□□□ -0.71
RPS4BP0CX36 WSC2YNL283C 1512 nt10.62□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms