Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC41.93■■■■■ 4.3
NclP09405 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC41.83■■■■■ 4.29
NclP09405 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41.8■■■■■ 4.28
NclP09405 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC41.78■■■■■ 4.28
NclP09405 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC41.78■■■■■ 4.28
NclP09405 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
NclP09405 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
NclP09405 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC41.64■■■■■ 4.26
NclP09405 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.61■■■■■ 4.25
NclP09405 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
NclP09405 Gm17082-201ENSMUST00000166043 1091 ntBASIC41.52■■■■■ 4.24
NclP09405 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC41.5■■■■■ 4.23
NclP09405 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
NclP09405 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
NclP09405 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
NclP09405 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC41.34■■■■■ 4.21
NclP09405 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC41.3■■■■■ 4.2
NclP09405 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC41.27■■■■■ 4.2
NclP09405 Gm27322-201ENSMUST00000184007 104 ntBASIC41.26■■■■■ 4.2
NclP09405 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC41.24■■■■■ 4.19
NclP09405 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
NclP09405 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC41.23■■■■■ 4.19
NclP09405 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
NclP09405 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC41.15■■■■■ 4.18
NclP09405 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC41.12■■■■■ 4.17
NclP09405 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC41.11■■■■■ 4.17
NclP09405 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC41.05■■■■■ 4.16
NclP09405 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
NclP09405 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
NclP09405 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC40.92■■■■■ 4.14
NclP09405 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC40.86■■■■■ 4.13
NclP09405 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC40.86■■■■■ 4.13
NclP09405 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC40.84■■■■■ 4.13
NclP09405 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
NclP09405 Gm24804-201ENSMUST00000174982 85 ntBASIC40.67■■■■■ 4.1
NclP09405 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC40.65■■■■■ 4.1
NclP09405 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.1
NclP09405 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.63■■■■■ 4.09
NclP09405 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.61■■■■■ 4.09
NclP09405 AL845457.1-201ENSMUST00000197244 68 ntBASIC40.58■■■■■ 4.09
NclP09405 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
NclP09405 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
NclP09405 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC40.55■■■■■ 4.08
NclP09405 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
NclP09405 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC40.54■■■■■ 4.08
NclP09405 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC40.51■■■■■ 4.08
NclP09405 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
NclP09405 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
NclP09405 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
NclP09405 AC166822.3-201ENSMUST00000227394 661 ntBASIC40.48■■■■■ 4.07
NclP09405 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC40.46■■■■■ 4.07
NclP09405 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
NclP09405 Zfp131-207ENSMUST00000224946 1783 ntBASIC40.38■■■■■ 4.05
NclP09405 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC40.35■■■■■ 4.05
NclP09405 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
NclP09405 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC40.27■■■■■ 4.04
NclP09405 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC40.26■■■■■ 4.04
NclP09405 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC40.21■■■■■ 4.03
NclP09405 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC40.21■■■■■ 4.03
NclP09405 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
NclP09405 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
NclP09405 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC40.12■■■■■ 4.01
NclP09405 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC40.1■■■■■ 4.01
NclP09405 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC40.1■■■■■ 4.01
NclP09405 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC40.03■■■■■ 4
NclP09405 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
NclP09405 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC40■■■■□ 3.99
NclP09405 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC39.98■■■■□ 3.99
NclP09405 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC39.97■■■■□ 3.99
NclP09405 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC39.96■■■■□ 3.99
NclP09405 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC39.94■■■■□ 3.98
NclP09405 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
NclP09405 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
NclP09405 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC39.85■■■■□ 3.97
NclP09405 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
NclP09405 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC39.82■■■■□ 3.97
NclP09405 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
NclP09405 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC39.73■■■■□ 3.95
NclP09405 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
NclP09405 Mipep-204ENSMUST00000225043 1548 ntBASIC39.7■■■■□ 3.95
NclP09405 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
NclP09405 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC39.67■■■■□ 3.94
NclP09405 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
NclP09405 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
NclP09405 Zfp131-205ENSMUST00000223812 663 ntBASIC39.63■■■■□ 3.93
NclP09405 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC39.61■■■■□ 3.93
NclP09405 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC39.61■■■■□ 3.93
NclP09405 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
NclP09405 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
NclP09405 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
NclP09405 Peli2-204ENSMUST00000226513 1320 ntBASIC39.52■■■■□ 3.92
NclP09405 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC39.5■■■■□ 3.91
NclP09405 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC39.48■■■■□ 3.91
NclP09405 Gm16148-201ENSMUST00000119653 893 ntBASIC39.48■■■■□ 3.91
NclP09405 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC39.48■■■■□ 3.91
NclP09405 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
NclP09405 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
NclP09405 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
NclP09405 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC39.44■■■■□ 3.9
NclP09405 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC39.43■■■■□ 3.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms