Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.48■■□□□ 1.19
P01643 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
P01643 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.42■■□□□ 1.18
P01643 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
P01643 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
P01643 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
P01643 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.17
P01643 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
P01643 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
P01643 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
P01643 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.23■■□□□ 1.15
P01643 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
P01643 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.17■■□□□ 1.14
P01643 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
P01643 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
P01643 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
P01643 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.14■■□□□ 1.13
P01643 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
P01643 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
P01643 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
P01643 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
P01643 Gm27322-201ENSMUST00000184007 104 ntBASIC22.11■■□□□ 1.13
P01643 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
P01643 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
P01643 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
P01643 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
P01643 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
P01643 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
P01643 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
P01643 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
P01643 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.89■■□□□ 1.09
P01643 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
P01643 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
P01643 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
P01643 Gm24804-201ENSMUST00000174982 85 ntBASIC21.79■■□□□ 1.08
P01643 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
P01643 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.78■■□□□ 1.08
P01643 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
P01643 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
P01643 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.76■■□□□ 1.07
P01643 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.76■■□□□ 1.07
P01643 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
P01643 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P01643 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
P01643 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
P01643 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
P01643 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
P01643 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
P01643 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.68■■□□□ 1.06
P01643 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
P01643 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.67■■□□□ 1.06
P01643 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.66■■□□□ 1.06
P01643 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
P01643 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
P01643 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01643 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01643 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.59■■□□□ 1.05
P01643 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01643 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P01643 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.52■■□□□ 1.04
P01643 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01643 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
P01643 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
P01643 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
P01643 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
P01643 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
P01643 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01643 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P01643 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P01643 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.41■■□□□ 1.02
P01643 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
P01643 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01643 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
P01643 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
P01643 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
P01643 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.32■■□□□ 1
P01643 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.31■■□□□ 1
P01643 Mipep-204ENSMUST00000225043 1548 ntBASIC21.29■■□□□ 1
P01643 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.29■■□□□ 1
P01643 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
P01643 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P01643 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
P01643 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P01643 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
P01643 Zfp131-205ENSMUST00000223812 663 ntBASIC21.22■□□□□ 0.99
P01643 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
P01643 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
P01643 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
P01643 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P01643 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01643 Peli2-204ENSMUST00000226513 1320 ntBASIC21.18■□□□□ 0.98
P01643 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01643 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01643 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
P01643 Gm16148-201ENSMUST00000119653 893 ntBASIC21.15■□□□□ 0.98
P01643 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01643 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
P01643 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01643 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
P01643 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms