Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.49■■■□□ 2.63
Slc6a20bO88575 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Slc6a20bO88575 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Slc6a20bO88575 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Slc6a20bO88575 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Slc6a20bO88575 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slc6a20bO88575 Zfp131-205ENSMUST00000223812 663 ntBASIC31.32■■■□□ 2.6
Slc6a20bO88575 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Slc6a20bO88575 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Slc6a20bO88575 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Slc6a20bO88575 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Slc6a20bO88575 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slc6a20bO88575 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Slc6a20bO88575 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Slc6a20bO88575 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Slc6a20bO88575 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.15■■■□□ 2.58
Slc6a20bO88575 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Slc6a20bO88575 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slc6a20bO88575 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.12■■■□□ 2.57
Slc6a20bO88575 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.12■■■□□ 2.57
Slc6a20bO88575 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Slc6a20bO88575 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Slc6a20bO88575 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31■■■□□ 2.55
Slc6a20bO88575 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Slc6a20bO88575 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC31■■■□□ 2.55
Slc6a20bO88575 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Slc6a20bO88575 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Slc6a20bO88575 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.9■■■□□ 2.54
Slc6a20bO88575 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Slc6a20bO88575 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Slc6a20bO88575 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Slc6a20bO88575 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Slc6a20bO88575 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.82■■■□□ 2.52
Slc6a20bO88575 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Slc6a20bO88575 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Slc6a20bO88575 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Slc6a20bO88575 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.78■■■□□ 2.52
Slc6a20bO88575 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Slc6a20bO88575 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Slc6a20bO88575 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.74■■■□□ 2.51
Slc6a20bO88575 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Slc6a20bO88575 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Slc6a20bO88575 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Slc6a20bO88575 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.68■■■□□ 2.5
Slc6a20bO88575 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Slc6a20bO88575 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Slc6a20bO88575 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.54■■■□□ 2.48
Slc6a20bO88575 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Slc6a20bO88575 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Slc6a20bO88575 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Slc6a20bO88575 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Slc6a20bO88575 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
Slc6a20bO88575 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Slc6a20bO88575 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Slc6a20bO88575 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Slc6a20bO88575 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.45■■■□□ 2.47
Slc6a20bO88575 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Slc6a20bO88575 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Slc6a20bO88575 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Slc6a20bO88575 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.41■■■□□ 2.46
Slc6a20bO88575 Gm16148-201ENSMUST00000119653 893 ntBASIC30.41■■■□□ 2.46
Slc6a20bO88575 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Slc6a20bO88575 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Slc6a20bO88575 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.35■■■□□ 2.45
Slc6a20bO88575 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Slc6a20bO88575 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.32■■■□□ 2.44
Slc6a20bO88575 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Slc6a20bO88575 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Slc6a20bO88575 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Slc6a20bO88575 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.27■■■□□ 2.44
Slc6a20bO88575 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Slc6a20bO88575 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Slc6a20bO88575 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Slc6a20bO88575 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
Slc6a20bO88575 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Slc6a20bO88575 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Slc6a20bO88575 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Slc6a20bO88575 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Slc6a20bO88575 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Slc6a20bO88575 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.13■■■□□ 2.41
Slc6a20bO88575 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Slc6a20bO88575 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Slc6a20bO88575 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Slc6a20bO88575 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Slc6a20bO88575 Peli2-204ENSMUST00000226513 1320 ntBASIC30.08■■■□□ 2.41
Slc6a20bO88575 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Slc6a20bO88575 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.07■■■□□ 2.4
Slc6a20bO88575 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Slc6a20bO88575 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Slc6a20bO88575 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.01■■■□□ 2.39
Slc6a20bO88575 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30■■■□□ 2.39
Slc6a20bO88575 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Slc6a20bO88575 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Slc6a20bO88575 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Slc6a20bO88575 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Slc6a20bO88575 Gm45855-201ENSMUST00000212546 880 ntBASIC29.95■■■□□ 2.39
Slc6a20bO88575 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Slc6a20bO88575 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Slc6a20bO88575 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Slc6a20bO88575 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms