Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Tgfbr3O88393 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Tgfbr3O88393 Gm27322-201ENSMUST00000184007 104 ntBASIC27.08■■□□□ 1.93
Tgfbr3O88393 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Tgfbr3O88393 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.07■■□□□ 1.92
Tgfbr3O88393 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tgfbr3O88393 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tgfbr3O88393 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.04■■□□□ 1.92
Tgfbr3O88393 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Tgfbr3O88393 Gm24804-201ENSMUST00000174982 85 ntBASIC26.99■■□□□ 1.91
Tgfbr3O88393 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tgfbr3O88393 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.95■■□□□ 1.91
Tgfbr3O88393 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.94■■□□□ 1.9
Tgfbr3O88393 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Tgfbr3O88393 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Tgfbr3O88393 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Tgfbr3O88393 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.84■■□□□ 1.89
Tgfbr3O88393 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tgfbr3O88393 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Tgfbr3O88393 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Tgfbr3O88393 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Tgfbr3O88393 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.66■■□□□ 1.86
Tgfbr3O88393 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tgfbr3O88393 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tgfbr3O88393 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tgfbr3O88393 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tgfbr3O88393 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.54■■□□□ 1.84
Tgfbr3O88393 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Tgfbr3O88393 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Tgfbr3O88393 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Tgfbr3O88393 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tgfbr3O88393 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tgfbr3O88393 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.51■■□□□ 1.83
Tgfbr3O88393 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tgfbr3O88393 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Tgfbr3O88393 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Tgfbr3O88393 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Tgfbr3O88393 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.42■■□□□ 1.82
Tgfbr3O88393 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.41■■□□□ 1.82
Tgfbr3O88393 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Tgfbr3O88393 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Tgfbr3O88393 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tgfbr3O88393 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Tgfbr3O88393 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Tgfbr3O88393 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Tgfbr3O88393 Zfp131-205ENSMUST00000223812 663 ntBASIC26.38■■□□□ 1.81
Tgfbr3O88393 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.35■■□□□ 1.81
Tgfbr3O88393 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Tgfbr3O88393 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tgfbr3O88393 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tgfbr3O88393 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tgfbr3O88393 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tgfbr3O88393 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Tgfbr3O88393 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Tgfbr3O88393 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Tgfbr3O88393 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.18■■□□□ 1.78
Tgfbr3O88393 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Tgfbr3O88393 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tgfbr3O88393 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tgfbr3O88393 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tgfbr3O88393 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.07■■□□□ 1.76
Tgfbr3O88393 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Tgfbr3O88393 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tgfbr3O88393 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tgfbr3O88393 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Tgfbr3O88393 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Tgfbr3O88393 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Tgfbr3O88393 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tgfbr3O88393 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.95■■□□□ 1.74
Tgfbr3O88393 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Tgfbr3O88393 Gm16148-201ENSMUST00000119653 893 ntBASIC25.92■■□□□ 1.74
Tgfbr3O88393 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.92■■□□□ 1.74
Tgfbr3O88393 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Tgfbr3O88393 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Tgfbr3O88393 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Tgfbr3O88393 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Tgfbr3O88393 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Tgfbr3O88393 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Tgfbr3O88393 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Tgfbr3O88393 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tgfbr3O88393 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Tgfbr3O88393 Peli2-204ENSMUST00000226513 1320 ntBASIC25.79■■□□□ 1.72
Tgfbr3O88393 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Tgfbr3O88393 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Tgfbr3O88393 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Tgfbr3O88393 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Tgfbr3O88393 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
Tgfbr3O88393 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Tgfbr3O88393 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Tgfbr3O88393 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Tgfbr3O88393 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Tgfbr3O88393 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.68■■□□□ 1.7
Tgfbr3O88393 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Tgfbr3O88393 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Tgfbr3O88393 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.66■■□□□ 1.7
Tgfbr3O88393 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Tgfbr3O88393 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Tgfbr3O88393 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.62■■□□□ 1.69
Tgfbr3O88393 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Tgfbr3O88393 Mipep-204ENSMUST00000225043 1548 ntBASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms