Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Ubr1O70481 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
Ubr1O70481 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.85■■■■□ 3.65
Ubr1O70481 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
Ubr1O70481 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.81■■■■□ 3.64
Ubr1O70481 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.79■■■■□ 3.64
Ubr1O70481 CT025624.2-201ENSMUST00000223609 1909 ntBASIC37.75■■■■□ 3.63
Ubr1O70481 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Ubr1O70481 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC37.61■■■■□ 3.61
Ubr1O70481 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.61
Ubr1O70481 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Ubr1O70481 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Ubr1O70481 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.51■■■■□ 3.6
Ubr1O70481 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC37.48■■■■□ 3.59
Ubr1O70481 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Ubr1O70481 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Ubr1O70481 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Ubr1O70481 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
Ubr1O70481 Gm27322-201ENSMUST00000184007 104 ntBASIC37.31■■■■□ 3.56
Ubr1O70481 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC37.29■■■■□ 3.56
Ubr1O70481 Gm24804-201ENSMUST00000174982 85 ntBASIC37.27■■■■□ 3.56
Ubr1O70481 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
Ubr1O70481 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Ubr1O70481 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Ubr1O70481 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC37.19■■■■□ 3.54
Ubr1O70481 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Ubr1O70481 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC37.03■■■■□ 3.52
Ubr1O70481 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC37.01■■■■□ 3.51
Ubr1O70481 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Ubr1O70481 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC36.96■■■■□ 3.51
Ubr1O70481 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Ubr1O70481 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
Ubr1O70481 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC36.88■■■■□ 3.49
Ubr1O70481 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Ubr1O70481 AL845457.1-201ENSMUST00000197244 68 ntBASIC36.86■■■■□ 3.49
Ubr1O70481 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC36.86■■■■□ 3.49
Ubr1O70481 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Ubr1O70481 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC36.82■■■■□ 3.48
Ubr1O70481 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Ubr1O70481 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Ubr1O70481 AC166822.3-201ENSMUST00000227394 661 ntBASIC36.8■■■■□ 3.48
Ubr1O70481 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC36.78■■■■□ 3.48
Ubr1O70481 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Ubr1O70481 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
Ubr1O70481 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Ubr1O70481 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC36.7■■■■□ 3.47
Ubr1O70481 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC36.7■■■■□ 3.46
Ubr1O70481 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Ubr1O70481 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC36.61■■■■□ 3.45
Ubr1O70481 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Ubr1O70481 Zfp131-207ENSMUST00000224946 1783 ntBASIC36.59■■■■□ 3.45
Ubr1O70481 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
Ubr1O70481 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Ubr1O70481 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Ubr1O70481 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Ubr1O70481 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
Ubr1O70481 Zfp131-205ENSMUST00000223812 663 ntBASIC36.51■■■■□ 3.44
Ubr1O70481 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Ubr1O70481 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Ubr1O70481 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC36.45■■■■□ 3.43
Ubr1O70481 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC36.43■■■■□ 3.42
Ubr1O70481 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
Ubr1O70481 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Ubr1O70481 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Ubr1O70481 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
Ubr1O70481 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Ubr1O70481 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
Ubr1O70481 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC36.23■■■■□ 3.39
Ubr1O70481 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
Ubr1O70481 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
Ubr1O70481 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
Ubr1O70481 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Ubr1O70481 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Ubr1O70481 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC36.1■■■■□ 3.37
Ubr1O70481 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Ubr1O70481 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC36.06■■■■□ 3.36
Ubr1O70481 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
Ubr1O70481 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Ubr1O70481 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
Ubr1O70481 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
Ubr1O70481 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Ubr1O70481 Peli2-204ENSMUST00000226513 1320 ntBASIC35.89■■■■□ 3.34
Ubr1O70481 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC35.89■■■■□ 3.34
Ubr1O70481 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Ubr1O70481 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC35.87■■■■□ 3.33
Ubr1O70481 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35.87■■■■□ 3.33
Ubr1O70481 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Ubr1O70481 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC35.85■■■■□ 3.33
Ubr1O70481 Mipep-204ENSMUST00000225043 1548 ntBASIC35.84■■■■□ 3.33
Ubr1O70481 Gm16148-201ENSMUST00000119653 893 ntBASIC35.83■■■■□ 3.33
Ubr1O70481 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Ubr1O70481 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Ubr1O70481 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ubr1O70481 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Ubr1O70481 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC35.77■■■■□ 3.32
Ubr1O70481 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.76■■■■□ 3.32
Ubr1O70481 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC35.74■■■■□ 3.31
Ubr1O70481 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ubr1O70481 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC35.72■■■■□ 3.31
Ubr1O70481 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC35.71■■■■□ 3.31
Retrieved 100 of 76,532 protein–RNA pairs in 7.4 ms