Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Trdmt1O55055 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.65■■■□□ 2.66
Trdmt1O55055 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.65■■■□□ 2.66
Trdmt1O55055 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Trdmt1O55055 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Trdmt1O55055 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Trdmt1O55055 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Trdmt1O55055 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Trdmt1O55055 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.59■■■□□ 2.65
Trdmt1O55055 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Trdmt1O55055 Gm27322-201ENSMUST00000184007 104 ntBASIC31.57■■■□□ 2.64
Trdmt1O55055 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.5■■■□□ 2.63
Trdmt1O55055 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trdmt1O55055 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Trdmt1O55055 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Trdmt1O55055 Gm24804-201ENSMUST00000174982 85 ntBASIC31.39■■■□□ 2.62
Trdmt1O55055 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Trdmt1O55055 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.24■■■□□ 2.59
Trdmt1O55055 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Trdmt1O55055 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Trdmt1O55055 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trdmt1O55055 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trdmt1O55055 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trdmt1O55055 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trdmt1O55055 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.14■■■□□ 2.58
Trdmt1O55055 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.07■■■□□ 2.56
Trdmt1O55055 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Trdmt1O55055 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Trdmt1O55055 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Trdmt1O55055 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Trdmt1O55055 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trdmt1O55055 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Trdmt1O55055 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.85■■■□□ 2.53
Trdmt1O55055 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.84■■■□□ 2.53
Trdmt1O55055 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Trdmt1O55055 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Trdmt1O55055 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trdmt1O55055 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Trdmt1O55055 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Trdmt1O55055 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Trdmt1O55055 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.8■■■□□ 2.52
Trdmt1O55055 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Trdmt1O55055 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Trdmt1O55055 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Trdmt1O55055 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Trdmt1O55055 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Trdmt1O55055 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Trdmt1O55055 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.73■■■□□ 2.51
Trdmt1O55055 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Trdmt1O55055 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trdmt1O55055 Zfp131-205ENSMUST00000223812 663 ntBASIC30.65■■■□□ 2.5
Trdmt1O55055 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Trdmt1O55055 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Trdmt1O55055 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Trdmt1O55055 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Trdmt1O55055 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Trdmt1O55055 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trdmt1O55055 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Trdmt1O55055 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Trdmt1O55055 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Trdmt1O55055 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.43■■■□□ 2.46
Trdmt1O55055 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.4■■■□□ 2.46
Trdmt1O55055 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Trdmt1O55055 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Trdmt1O55055 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Trdmt1O55055 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Trdmt1O55055 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Trdmt1O55055 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Trdmt1O55055 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Trdmt1O55055 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Trdmt1O55055 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Trdmt1O55055 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.3■■■□□ 2.44
Trdmt1O55055 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Trdmt1O55055 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Trdmt1O55055 Gm16148-201ENSMUST00000119653 893 ntBASIC30.21■■■□□ 2.43
Trdmt1O55055 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.42
Trdmt1O55055 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trdmt1O55055 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Trdmt1O55055 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Trdmt1O55055 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Trdmt1O55055 Peli2-204ENSMUST00000226513 1320 ntBASIC30.13■■■□□ 2.41
Trdmt1O55055 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Trdmt1O55055 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.1■■■□□ 2.41
Trdmt1O55055 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Trdmt1O55055 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Trdmt1O55055 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Trdmt1O55055 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Trdmt1O55055 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Trdmt1O55055 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.05■■■□□ 2.4
Trdmt1O55055 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.02■■■□□ 2.4
Trdmt1O55055 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trdmt1O55055 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trdmt1O55055 Mipep-204ENSMUST00000225043 1548 ntBASIC30■■■□□ 2.39
Trdmt1O55055 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
Trdmt1O55055 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Trdmt1O55055 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Trdmt1O55055 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trdmt1O55055 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Trdmt1O55055 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Trdmt1O55055 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms